DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1mu and Ap1m2

DIOPT Version :9

Sequence 1:NP_649906.1 Gene:AP-1mu / 41150 FlyBaseID:FBgn0024833 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001103770.1 Gene:Ap1m2 / 11768 MGIID:1336974 Length:425 Species:Mus musculus


Alignment Length:429 Identity:323/429 - (75%)
Similarity:378/429 - (88%) Gaps:7/429 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSAIFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAETTFAYIKTNN 65
            ||:||:|:||||||.||||||:|| :.|..||.||||||:|||||::.|:|......|.:||.:|
Mouse     1 MSASAVFILDVKGKPLISRNYKGD-VPMTEIDHFMPLLMQREEEGVLAPLLSHGRVHFLWIKHSN 64

  Fly    66 LYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNFVIIYELLDELLDFGYPQTTD 130
            ||:|:||  .||.|.:||:.||:|..:||.|||||||||||||||||:|||||||:|||:|||||
Mouse    65 LYLVATT--LKNANASLVYSFLYKTVEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQTTD 127

  Fly   131 SKILQEYITQEGHKLEL-QPRIPVAVTNAVSWRSEGIKYRKNEVFLDVIESVNLLANANGNVLRS 194
            ||||||||||:|:|||. :.|:|..||||||||||||||:|||||:|||||||||.||||:||.|
Mouse   128 SKILQEYITQQGNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLS 192

  Fly   195 EIVGAIKMRVYLSGMPELRLGLNDKVLFESTG--RGKSKSVELEDVKFHQCVRLSRFENDRTISF 257
            ||||.||::|:|||||||||||||:||||.||  ..|:|||||||||||||||||||:|||||||
Mouse   193 EIVGTIKLKVFLSGMPELRLGLNDRVLFELTGLSGSKNKSVELEDVKFHQCVRLSRFDNDRTISF 257

  Fly   258 IPPDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIVIPVPADA 322
            |||||:||||||||:|.||||||||||||:.:|||||.|:|||.|||::|.||.|||.:|||:||
Mouse   258 IPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEISVPVPSDA 322

  Fly   323 DSPKFKTTIGSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPY 387
            |||:|||::||.||.||:|.:||:||||||||||||||||||||||:|: .||:|||.|:|||||
Mouse   323 DSPRFKTSVGSAKYVPEKNVVIWSIKSFPGGKEYLMRAHFGLPSVETEE-VEGRPPIGVKFEIPY 386

  Fly   388 FTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRTN 426
            ||.|||||||:|||||||||||||||||||:|||||||:
Mouse   387 FTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQLRTS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1muNP_649906.1 AP1_Mu_N 4..145 CDD:341439 95/140 (68%)
AP-1_Mu1A_Cterm 155..425 CDD:271166 219/271 (81%)
Ap1m2NP_001103770.1 AP1_Mu_N 4..142 CDD:341439 95/140 (68%)
AP_MHD_Cterm 154..423 CDD:416027 217/269 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 183 1.000 Domainoid score I3425
eggNOG 1 0.900 - - E1_KOG0937
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54006
OrthoDB 1 1.010 - - D246783at33208
OrthoFinder 1 1.000 - - FOG0001611
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101263
Panther 1 1.100 - - O PTHR10529
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1021
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.790

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