DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-1mu and AP2M1

DIOPT Version :10

Sequence 1:NP_649906.1 Gene:AP-1mu / 41150 FlyBaseID:FBgn0024833 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001298127.1 Gene:AP2M1 / 1173 HGNCID:564 Length:460 Species:Homo sapiens


Alignment Length:461 Identity:181/461 - (39%)
Similarity:272/461 - (59%) Gaps:48/461 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IFVLDVKGKVLISRNYRGD-----NIDMAV-------------------IDKFMPLLMEREEEGL 46
            :|:.:.||:|||||.||.|     ..|.||                   :|.|...::...:: :
Human     5 LFIYNHKGEVLISRVYRDDIGSRQAADSAVFSSSGPFPGEWLEANRRNAVDAFRVNVIHARQQ-V 68

  Fly    47 ITPILQTAETTFAYIKTNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNFV 111
            .:|:...|.|:|.::|.:|:::.:.|  .:|||.|:||.||:|:..|...||.::.||:|::|||
Human    69 RSPVTNIARTSFFHVKRSNIWLAAVT--KQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFV 131

  Fly   112 IIYELLDELLDFGYPQTTDSKILQEYITQEGHK-----LELQPRIPVAVTNAVSWRSEGIKYRKN 171
            :|||||||:|||||||.:::..|:.:|||:|.|     .|.|.:|...||..:.||.||||||:|
Human   132 LIYELLDEILDFGYPQNSETGALKTFITQQGIKS
QHQTKEEQSQITSQVTGQIGWRREGIKYRRN 196

  Fly   172 EVFLDVIESVNLLANANGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKS------ 230
            |:||||:||||||.:..|.||.:.:.|.:.|:.|||||||.:.|:|||::.|..|:|.:      
Human   197 ELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKS 261

  Fly   231 --KSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIERHAHSRV 293
              :|:.::|..||||||||:|:::|:|||||||||||||.||....:.....:..::.....:::
Human   262 GKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTKL 326

  Fly   294 EYMIKAKSQFKRRSTANNVEIVIPVPADADSPKFKTTIGSCKYAPEQNAIIWTIKSFPGGKEYLM 358
            |..:..||.||....|..:|:.||.|.:....:.....|..||...:|||:|.||...|.||..:
Human   327 EVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQI 391

  Fly   359 RAHFGLPSVESEDNTE-GKPPIQVRFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQN 418
            .|...|  :.:.|..: .:|||.:.||:| |..||::|||||:.|.    |.:..:.|||||.::
Human   392 SAEIEL--LPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRS 453

  Fly   419 GDYQLR 424
            |.|:.|
Human   454 GIYETR 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1muNP_649906.1 AP1_Mu_N 4..145 CDD:341439 61/167 (37%)
AP-1_Mu1A_Cterm 155..425 CDD:271166 117/283 (41%)
AP2M1NP_001298127.1 AP2_Mu_N 1..165 CDD:341440 60/162 (37%)
AP-2_Mu2_Cterm 193..459 CDD:271159 108/268 (40%)

Return to query results.
Submit another query.