DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-1mu and ap1m1

DIOPT Version :9

Sequence 1:NP_649906.1 Gene:AP-1mu / 41150 FlyBaseID:FBgn0024833 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001318056.1 Gene:ap1m1 / 100330411 ZFINID:ZDB-GENE-110126-1 Length:423 Species:Danio rerio


Alignment Length:426 Identity:354/426 - (83%)
Similarity:388/426 - (91%) Gaps:5/426 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSAIFVLDVKGKVLISRNYRGDNIDMAVIDKFMPLLMEREEEGLITPILQTAETTFAYIKTNN 65
            ||:||::|||:||||||.|||||| :||:.|:.||.|||::||||.::|||......|.:||.||
Zfish     1 MSASAVYVLDLKGKVLICRNYRGD-VDMSEIEHFMTLLMDKEEEGTLSPILAHGGVRFMWIKHNN 64

  Fly    66 LYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESIRDNFVIIYELLDELLDFGYPQTTD 130
            ||:|:|:  .||..::|||.||:||.|||.|||||||||||||||||||||||||:|||||||||
Zfish    65 LYLVATS--KKNACVSLVFSFLYKIVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTD 127

  Fly   131 SKILQEYITQEGHKLEL-QPRIPVAVTNAVSWRSEGIKYRKNEVFLDVIESVNLLANANGNVLRS 194
            |||||||||||||||:. .||.|..||||||||||||||||||||||||||||||.:||||||||
Zfish   128 SKILQEYITQEGHKLDTGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIESVNLLVSANGNVLRS 192

  Fly   195 EIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIP 259
            ||||:|||||:||||||||||||||||||:|||||||||||||||||||||||||||||||||||
Zfish   193 EIVGSIKMRVFLSGMPELRLGLNDKVLFENTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIP 257

  Fly   260 PDGEFELMSYRLNTHVKPLIWIESVIERHAHSRVEYMIKAKSQFKRRSTANNVEIVIPVPADADS 324
            |||||||||||||||||||||||||||:|:|||:|||||||||||||||||||||.||||.||||
Zfish   258 PDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPTDADS 322

  Fly   325 PKFKTTIGSCKYAPEQNAIIWTIKSFPGGKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFT 389
            ||||||:||.|:.||.:.|:|:||||||||||||||||||||||:||. ||||||.|:|||||||
Zfish   323 PKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDK-EGKPPISVKFEIPYFT 386

  Fly   390 TSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRT 425
            ||||||||||||||||||||||||||||||||||||
Zfish   387 TSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRT 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-1muNP_649906.1 AP1_Mu_N 4..145 CDD:341439 100/140 (71%)
AP-1_Mu1A_Cterm 155..425 CDD:271166 245/269 (91%)
ap1m1NP_001318056.1 AP1_Mu_N 4..142 CDD:341439 100/140 (71%)
AP-1_Mu1A_Cterm 153..422 CDD:271166 245/269 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589994
Domainoid 1 1.000 494 1.000 Domainoid score I350
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 703 1.000 Inparanoid score I644
OMA 1 1.010 - - QHG54006
OrthoDB 1 1.010 - - D246783at33208
OrthoFinder 1 1.000 - - FOG0001611
OrthoInspector 1 1.000 - - oto40462
orthoMCL 1 0.900 - - OOG6_101263
Panther 1 1.100 - - LDO PTHR10529
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1021
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.910

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