DRSC/TRiP Functional Genomics Resources

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Protein Alignment BckdhA and PDA1

DIOPT Version :10

Sequence 1:NP_649905.1 Gene:BckdhA / 41149 FlyBaseID:FBgn0037709 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_011105.4 Gene:PDA1 / 856925 SGDID:S000000980 Length:420 Species:Saccharomyces cerevisiae


Alignment Length:435 Identity:115/435 - (26%)
Similarity:186/435 - (42%) Gaps:73/435 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SFLRKSVHL---LGSVARRQRHLKVIEGAISTAA--RDFSSKPSEDYANFPGAKAPFVSKLNLIQ 61
            ||.|:...|   ||:|.|....:    |.:.|.|  :....|..||                 |:
Yeast     5 SFKRQPSQLVRGLGAVLRTPTRI----GHVRTMATLKTTDKKAPED-----------------IE 48

  Fly    62 PEDYAPIPIYRVMDQDGYIADETQDPQLGREVVE----KMFRDMVLLNTMD---KILYESQR-QG 118
            ..|...|.    :.:..:.:...:.|.|..|..:    :|::|||::..|:   ..||:::: :|
Yeast    49 GSDTVQIE----LPESSFESYMLEPPDLSYETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRG 109

  Fly   119 RISFYMTNFGEEASHIGSAAALEMRDLIYGQYREAGVLVWRGFRIDQFIDQCYGNTDDLGRGKQM 183
               |...:.|:||..:|...|:...|.|...||..|....||..:...:.:..|....:..||..
Yeast   110 ---FCHLSVGQEAIAVGIENAITKLDSIITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGG 171

  Fly   184 PVH------YGSRELNFVTISSPLSTQMPQAVGAAYAMKLRPNNDACVVCYFGEGAASEGDAHAA 242
            .:|      ||...:        :..|:|...|.|:|.:.: |.|||....:|:||:::|....:
Yeast   172 SMHLYAPGFYGGNGI--------VGAQVPLGAGLAFAHQYK-NEDACSFTLYGDGASNQGQVFES 227

  Fly   243 FNFAATLGCPAILFCRNNGFAISTPSH------EQYKGDGIAGRGPMGYGITTIRVDGTDVFAVY 301
            ||.|.....|.:..|.||.:.:.|.:.      |.:|         .|..|..::|:|.|:.|||
Yeast   228 FNMAKLWNLPVVFCCENNKYGMGTAASRSSAMTEYFK---------RGQYIPGLKVNGMDILAVY 283

  Fly   302 NAMKAAREYVLKENKPVVFEALAYRVGHHSTSDDSTAYRPAEEIEIWNSVEHPISKLKRYMVHKG 366
            .|.|.|:::.|....|:|.|...||.|.||.||..|.||..:||:...|...||:.||.:::..|
Yeast   284 QASKFAKDWCLSGKGPLVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRSKNDPIAGLKMHLIDLG 348

  Fly   367 WFDETVENEYVKDIRKKVLKQIAVSEKKLKPNWR--EMFEGVYAE 409
            ...|.....|.|..||.|.:|:.:::....|..:  .:||.||.:
Yeast   349 IATEAEVKAYDKSARKYVDEQVELADAAPPPEAKLSILFEDVYVK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BckdhANP_649905.1 TPP_E1_PDC_ADC_BCADC 97..389 CDD:238958 90/307 (29%)
PDA1NP_011105.4 TPP_enzymes 50..394 CDD:470272 100/369 (27%)

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