DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BckdhA and bckdha

DIOPT Version :10

Sequence 1:NP_649905.1 Gene:BckdhA / 41149 FlyBaseID:FBgn0037709 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001019590.1 Gene:bckdha / 554124 ZFINID:ZDB-GENE-050522-376 Length:446 Species:Danio rerio


Alignment Length:436 Identity:248/436 - (56%)
Similarity:322/436 - (73%) Gaps:7/436 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LRKSVHLLGSVARRQRHLKVIEGAISTAARDFSSKPSEDYANFPGAKAPFVSKLNLIQPEDYAPI 68
            :|::..|..:...:||..:| .|.:    |..|...|::...||||.|.|:..|..|||...:.|
Zfish    18 IRQNTALKATTLLQQRGFRV-NGVL----RQQSIDDSDEKPQFPGASAEFIDHLEFIQPNVISGI 77

  Fly    69 PIYRVMDQDGYIADETQDPQLGREVVEKMFRDMVLLNTMDKILYESQRQGRISFYMTNFGEEASH 133
            |:|||||:.|.|.:.::||||.:|.|...::.|.||||||:|||||||||||||||||:|||.:|
Zfish    78 PVYRVMDRQGQIINPSEDPQLSKETVLNFYQKMTLLNTMDRILYESQRQGRISFYMTNYGEEGTH 142

  Fly   134 IGSAAALEMRDLIYGQYREAGVLVWRGFRIDQFIDQCYGNTDDLGRGKQMPVHYGSRELNFVTIS 198
            |||||||:..||::|||||||||::|||.:|.|:.|||.|.||||:|:||||||||::|||||||
Zfish   143 IGSAAALDPSDLVFGQYREAGVLMYRGFPLDLFMAQCYANADDLGKGRQMPVHYGSKDLNFVTIS 207

  Fly   199 SPLSTQMPQAVGAAYAMKLRPNNDACVVCYFGEGAASEGDAHAAFNFAATLGCPAILFCRNNGFA 263
            |||:||:|||.|||||:| |.|.:..|:|||||||||||||||.|||:|||.||.|.||||||:|
Zfish   208 SPLATQIPQAAGAAYAVK-RENANRVVICYFGEGAASEGDAHAGFNFSATLECPLIFFCRNNGYA 271

  Fly   264 ISTPSHEQYKGDGIAGRGPMGYGITTIRVDGTDVFAVYNAMKAAREYVLKENKPVVFEALAYRVG 328
            ||||::|||:|||||.||| |||:.:|||||.||||||||.|.||...:.||:|.:.||:.||:|
Zfish   272 ISTPTNEQYRGDGIAARGP-GYGLMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIG 335

  Fly   329 HHSTSDDSTAYRPAEEIEIWNSVEHPISKLKRYMVHKGWFDETVENEYVKDIRKKVLKQIAVSEK 393
            ||||||||:|||..:|:..|:..:||||:|:.||..:.|:.|..|..:.|..||.|::....:|:
Zfish   336 HHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYMTARDWWGEDEERAWRKQSRKLVMEAFERAER 400

  Fly   394 KLKPNWREMFEGVYAEMPDHLIEQRSELEKHIEAHKEHYPLKDFEK 439
            :||||...||..||.||..|:.:|:..:.:|::.:||||||..:||
Zfish   401 RLKPNPDLMFTDVYDEMVPHIAKQKDSMWRHVQQYKEHYPLDHYEK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BckdhANP_649905.1 TPP_E1_PDC_ADC_BCADC 97..389 CDD:238958 192/291 (66%)
bckdhaNP_001019590.1 AcoA 81..426 CDD:440689 217/346 (63%)

Return to query results.
Submit another query.