DRSC/TRiP Functional Genomics Resources

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Protein Alignment BckdhA and Pdha

DIOPT Version :10

Sequence 1:NP_649905.1 Gene:BckdhA / 41149 FlyBaseID:FBgn0037709 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_726945.1 Gene:Pdha / 31406 FlyBaseID:FBgn0028325 Length:443 Species:Drosophila melanogaster


Alignment Length:416 Identity:114/416 - (27%)
Similarity:167/416 - (40%) Gaps:70/416 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SEDYANFPGAKAPFVSKLNLIQPEDYA---------PIPIYRVMDQDGYIADETQDPQLGREVVE 95
            |..:..|..|....|||.|     :||         |..::|:.:........|:|..|      
  Fly    57 SSFFGLFQNAAQAGVSKTN-----NYATEATVQVNRPFKLHRLDEGPATEVKLTKDQAL------ 110

  Fly    96 KMFRDMVLLNTMDKI---LY-ESQRQGRISFYMTNFGEEASHIGSAAALEMRDLIYGQYREAGVL 156
            |.:..|..:..::..   || |...:|....|.   |:||..:|..||:...|.|...||..|..
  Fly   111 KYYTQMQTIRRLETAAGNLYKEKIIRGFCHLYS---GQEACAVGMKAAMRDVDNIISAYRVHGWT 172

  Fly   157 VWRGFRIDQFIDQCYGNTDDLGRGKQMPVH-YGSRELNFVTISSPLSTQMPQAVGAAYAMKLRPN 220
            ...|......:.:..|......|||...:| |..   ||...:..:..|:|...|...|.|.:.|
  Fly   173 YLMGVSPSGVLAELTGVQGGCARGKGGSMHMYAP---NFYGGNGIVGAQVPLGAGVGLACKYKGN 234

  Fly   221 NDACVVCYFGEGAASEGDAHAAFNFAATLGCPAILFCRNNGFAISTPSH------EQY-KGDGIA 278
            ...|:..| |:|||::|....|:|.|.....|.|..|.||.:.:.|.|.      :.| :||.:.
  Fly   235 GGMCLALY-GDGAANQGQVFEAYNMAYLWKLPVIFVCENNNYGMGTSSERASCNTDYYTRGDALP 298

  Fly   279 GRGPMGYGITTIRVDGTDVFAVYNAMKAAREYVLKENKPVVFEALAYRVGHHSTSDDSTAYRPAE 343
            |          |.|||.||.||.:|.:.|..|| ..:.|:|.|...||...||.||..|:||..|
  Fly   299 G----------IWVDGMDVLAVRSATEFAINYV-NTHGPLVMETNTYRYSGHSMSDPGTSYRTRE 352

  Fly   344 EIEIWNSVEHPISKLKRYMVHKGWFDETVENEYVKDIRKKVLKQI------AVSEKKLKPN--WR 400
            ||:.......||:..|...:..|    .:..:.||.|..||.|::      |.|:.:|..:  |.
  Fly   353 EIQEVRQKRDPITSFKELCIELG----LITTDEVKAIDLKVRKEVDEATAFAKSDAELGVSHLWT 413

  Fly   401 EMF--------EGVYAEMPDHLIEQR 418
            :::        .|..|...||:.|::
  Fly   414 DVYSNNLEPKLRGTIAYDIDHIQERK 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BckdhANP_649905.1 TPP_E1_PDC_ADC_BCADC 97..389 CDD:238958 90/309 (29%)
PdhaNP_726945.1 TPP_enzymes 78..426 CDD:470272 101/375 (27%)

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