Protein Alignment RnpS1 and SR45

DIOPT Version :9

• Sequence 1: NP_649903.1
• Gene: RnpS1 / 41147
• FlyBaseID: FBgn0037707
• Length: 374
• Species: Drosophila melanogaster
• Sequence 2: NP_001185014.1
• Gene: SR45 / 838230
• AraportID: AT1G16610
• Length: 425
• Species: Arabidopsis thaliana
• Alignment Length: 442
• Identity: 126/442 - (28%)
• Similarity: 151/442 - (34%)
• Gaps: 205/442 - (46%)

  Fly    40 RKRRGSASSSSDSRSSTSDSSSSRSSSGSSRSSSSSSSDSSSSSSSSSSDSDRSEKNRRRGGGAA 104
            |.||..:.|.|.||      |||||.||||.|.|.|.|.|.|.|.||||...||..
plant     6 RGRRSPSVSGSSSR------SSSRSRSGSSPSRSISRSRSRSRSLSSSSSPSRSVS--------- 55

  Fly   105 GKDKDKDKPSARSRSRSRTRSPRRVSKSPRPGSKARKEPERDRDRRSRSRDRARRAGSNDRAAAD 169
                            |.:|||.|..|||                          ||
plant    56 ----------------SGSRSPPRRGKSP--------------------------AG-------- 70

  Fly   170 SNNVKRERSRSASRSRSPRRRGRGSVERTPPPKRRERSRSRTRSPSPKQVR----IHVGRLTRNV 230
                             |.||||.    .|||..:..|     |||.|.|:    :||..|:|||
plant    71 -----------------PARRGRS----PPPPPSKGAS-----SPSKKAVQESLVLHVDSLSRNV 109

  Fly   231 TKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHMDGGQIDGQEITVS- 294
            .:.|:.|||.:||:|.:||..:|| ..|..||..:||:....|.|.|..:|||.||||:.:..:
plant   110 NEAHLKEIFGNFGEVIHVEIAMDR-AVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKATF 173

  Fly   295 -------------PVVLVKQR-------------------------------------------- 302
                         ||....:|
plant   174 TLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSPRRRSPLPRRG 238

  Fly   303 --------------------------PPMRRPSPPMR-----RPQNNRWRSPPQFNRFNNRGGGG 336
                                      ||.|||:.|.|     .|...|:||||:.:....|
plant   239 LSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRIR---- 299

  Fly   337 GGGGGRRQSPM---------RNRRSP------RRRSRSPIRRRRRSNSSDSS 373
             |...||:||:         |..|||      ||||||||||..||.||..|
plant   300 -GSPVRRRSPLPLRRRSPPPRRLRSPPRRSPIRRRSRSPIRRPGRSRSSSIS 350

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RnpS1	NP_649903.1	RRM	<196..>301	CDD:223796	43/122 (35%)
		RRM_RNPS1	221..294	CDD:240811	32/72 (44%)
SR45	NP_001185014.1	RRM	<96..>199	CDD:223796	35/103 (34%)
		RRM_RNPS1	100..172	CDD:240811	32/72 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	59	1.000	Domainoid score	I3895
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	107	1.000	Inparanoid score	I2103
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1524222at2759
OrthoFinder	1	1.000	-	-		FOG0003226
OrthoInspector	1	1.000	-	-		otm3445
orthoMCL	1	0.900	-	-		OOG6_103512
Panther	1	1.100	-	-	LDO	PTHR15481
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	8.060