Protein Alignment RnpS1 and TRA2B

DIOPT Version :10

• Sequence 1: NP_649903.1
• Gene: RnpS1 / 41147
• FlyBaseID: FBgn0037707
• Length: 374
• Species: Drosophila melanogaster
• Sequence 2: NP_004584.1
• Gene: TRA2B / 6434
• HGNCID: 10781
• Length: 288
• Species: Homo sapiens
• Alignment Length: 310
• Identity: 95/310 - (30%)
• Similarity: 133/310 - (42%)
• Gaps: 41/310 - (13%)

  Fly    82 SSSSSSSDSDRSEKNRRRGGGAAGKDKDKDKPSARSRSRSRTRSPRRVSKSPRPGSKARKEPERD 146
            |.|...:..:|..::..|.|.|.|..|......|||||:..:|..|..|:|
Human     2 SDSGEQNYGERESRSASRSGSAHGSGKSARHTPARSRSKEDSRRSRSKSRS-------------- 52

  Fly   147 RDRRSRSRDRARRAGSNDRAAADSNNVKRERSRSASRSRSPRRRGRGSVERTPPPKRRERSRSRT 211
               ||.||.|:||:.......:.|.:....||||.|.||..||  |.|...:|...||....:|.
Human    53 ---RSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRR--RHSHSHSPMSTRRRHVGNRA 112

  Fly   212 RSPSPKQVRIHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCES 276
             :|.| ...:.|..|:...|:..:.|:||.:|.:.:|....|: .....||.|||.:...:|.:.
Human   113 -NPDP-NCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQ-QSRRSRGFAFVYFENVDDAKE 174

  Fly   277 AMKHMDGGQIDGQEITVSPVVLVKQRPPMRRPSPPMRRPQNNRWRSPPQFNRFNNRG-------- 333
            |.:..:|.::||:.|.|.  ..:.:||....|...|.||.....|....::|..:||
Human   175 AKERANGMELDGRRIRVD--FSITKRPHTPTPGIYMGRPTYGSSRRRDYYDRGYDRGYDDRDYYS 237

  Fly   334 ----GGGGGGGGRRQSPMRN----RRSPR-RRSRSPIRRRRRSNSSDSSR 374
                ||||||||.|.:..|:    ||||. ..||...|.|.||.|....|
Human   238 RSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRSRSYSPRR 287

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RnpS1	NP_649903.1	RRM_RNPS1	221..294	CDD:409800	20/72 (28%)
TRA2B	NP_004584.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..114		40/131 (31%)
		RRM_TRA2	117..196	CDD:409798	21/81 (26%)
		Linker	193..230		9/36 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	196..225		7/28 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	242..288		22/46 (48%)