DRSC/TRiP Functional Genomics Resources

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Protein Alignment RnpS1 and RBM3

DIOPT Version :10

Sequence 1:NP_649903.1 Gene:RnpS1 / 41147 FlyBaseID:FBgn0037707 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_006734.1 Gene:RBM3 / 5935 HGNCID:9900 Length:157 Species:Homo sapiens


Alignment Length:128 Identity:33/128 - (25%)
Similarity:54/128 - (42%) Gaps:13/128 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 SPKQVRIHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMK 279
            |.::.::.||.|..|..:..:.:.|||||.:..|....|| .....||..|:.:..||....||:
Human     2 SSEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDR-ETQRSRGFGFITFTNPEHASVAMR 65

  Fly   280 HMDGGQIDGQEITVSPVVLVKQRPPMRRPSPPMRRPQNNRWRSPPQFNRFNNRGGGGGGGGGR 342
            .|:|..:||::|.|.            ......|..:...:.:..:...::..||..|.|.||
Human    66 AMNGESLDGRQIRVD------------HAGKSARGTRGGGFGAHGRGRSYSRGGGDQGYGSGR 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnpS1NP_649903.1 RRM_RNPS1 221..294 CDD:409800 24/72 (33%)
RBM3NP_006734.1 RRM_CIRBP_RBM3 6..85 CDD:409883 25/91 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..157 7/36 (19%)

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