Protein Alignment RnpS1 and rbm8a

DIOPT Version :10

• Sequence 1: NP_649903.1
• Gene: RnpS1 / 41147
• FlyBaseID: FBgn0037707
• Length: 374
• Species: Drosophila melanogaster
• Sequence 2: NP_001013363.1
• Gene: rbm8a / 503767
• ZFINID: ZDB-GENE-050306-51
• Length: 174
• Species: Danio rerio
• Alignment Length: 201
• Identity: 53/201 - (26%)
• Similarity: 84/201 - (41%)
• Gaps: 73/201 - (36%)

  Fly   183 RSRSPRRRGRGSVERTPPPKRRERSRSRTR-----------SPSPKQV----RIHVGRLTRNVTK 232
            :.::.:|:|||.       ...|.:|||.|           .|.|::.    .:.|..:....|:
Zfish    29 KEKAKKRKGRGF-------GSEEGARSRVREDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATE 86

  Fly   233 DHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHMDGGQIDGQEITVSPVV 297
            :.|.:.|:.||::||:...:|| ...:.:|.|.|||.|.::.::||:.::|.::.||.|:|.
Zfish    87 EDVHDKFAEFGEIKNLHLNLDR-RTGYLKGYALVEYETYKEAQAAMEGLNGQELMGQPISVD--- 147

  Fly   298 LVKQRPPMRRPSPPMRRPQNNRW---RSPPQFNRFNNRGGGGGGGGGRRQSPMRNRRSPRRRSRS 359
                                  |   |.||:..|   |||                   ||||||
Zfish   148 ----------------------WCFVRGPPKSKR---RGG-------------------RRRSRS 168

  Fly   360 PIRRRR 365
            |.||||
Zfish   169 PDRRRR 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RnpS1	NP_649903.1	RRM_RNPS1	221..294	CDD:409800	22/72 (31%)
rbm8a	NP_001013363.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..70		11/47 (23%)
		RRM_RBM8	67..154	CDD:409762	25/112 (22%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	151..174		16/44 (36%)