Protein Alignment RnpS1 and srsf2a

DIOPT Version :9

• Sequence 1: NP_649903.1
• Gene: RnpS1 / 41147
• FlyBaseID: FBgn0037707
• Length: 374
• Species: Drosophila melanogaster
• Sequence 2: NP_998547.1
• Gene: srsf2a / 406691
• ZFINID: ZDB-GENE-040426-2706
• Length: 225
• Species: Danio rerio
• Alignment Length: 180
• Identity: 58/180 - (32%)
• Similarity: 80/180 - (44%)
• Gaps: 29/180 - (16%)

  Fly   221 IHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHMDGGQ 285
            :.|..||...:.:.:..:|..:|.|.:|..|.||:... .||.|||.:....|.|.||..|||..
Zfish    16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKE-SRGFAFVRFHDKRDAEDAMDAMDGAL 79

  Fly   286 IDGQEITVSPVVLVKQRPP----MRRPSPPMR---RPQNNRWRSPPQFNRFNNRGGGGGGGGGR- 342
            :||:|:.|.  :....|||    .||.:||.|   ..:.:|.|||.:.....:|.........|
Zfish    80 LDGRELRVQ--MARYGRPPDAHYSRRGAPPRRYGGYGRRSRSRSPRRRKHSRSRSRSRSRSRSRS 142

  Fly   343 --RQSPMRNR---------------RSPRR-RSRSPIRRRRRSNSSDSSR 374
              |.|..|:|               |:||| :|:||.|.|.||.|...||
Zfish   143 RSRYSRSRSRSYSRSRSRSRSRSKTRTPRRSKSKSPSRSRSRSKSKSHSR 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RnpS1	NP_649903.1	RRM	<196..>301	CDD:223796	26/79 (33%)
		RRM_RNPS1	221..294	CDD:240811	25/72 (35%)
srsf2a	NP_998547.1	RRM	<5..>91	CDD:223796	26/77 (34%)
		RRM_SRSF2_SRSF8	16..88	CDD:240757	25/72 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1169
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.940