Protein Alignment RnpS1 and PABPN1L

DIOPT Version :9

• Sequence 1: NP_649903.1
• Gene: RnpS1 / 41147
• FlyBaseID: FBgn0037707
• Length: 374
• Species: Drosophila melanogaster
• Sequence 2: NP_001372638.1
• Gene: PABPN1L / 390748
• HGNCID: 37237
• Length: 297
• Species: Homo sapiens
• Alignment Length: 338
• Identity: 64/338 - (18%)
• Similarity: 109/338 - (32%)
• Gaps: 99/338 - (29%)

  Fly     9 GEGEKEKDNKEKVAKEKDGKATSGSSRRDRERKRRGSASSSSDSRSSTSDSSSSRSSSGSSR--- 70
            |||::||:.:|...:::||.|....|..::|.... ......:..:......:...:.|:.|
Human    45 GEGKEEKEEEEDAEEDQDGDAGFLLSLLEQENLAE-CPLPDQELEAIKMKVCAMEQAEGTPRPPG 108

  Fly    71 -SSSSSSSDSSSSSSSSSSDSDRSEKNRRRGGGAAGKDKDKDKPSARSRSRSRTRSPRRVSKSPR 134
             ...:...:.:::....|.::        .|...:|..::|.:...||.........|...:..|
Human   109 VQQQAEEEEGTAAGQLLSPET--------VGCPLSGTPEEKVEADHRSVYVGNLCLHRVCHQGLR 165

  Fly   135 PGSK-ARKEPERDRDRRSRSRDRARRAGSNDRAAADSNNVKRER-SRSASRSRSPRRRGRGSVER 197
            .|.: |..||               ..|...:.||:.|.:..:: .|....||:||.:| |::..
Human   166 AGRRGAGPEP---------------LPGPGHQGAAEKNQLPWDQLHRPRGPSRTPRLQG-GTLPP 214

  Fly   198 TPPPKRRERSRSRTRSPSPKQVRIHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRG 262
            ..||.:.....:|. .|.|.::...|                          |.|.:..|:|.||
Human   215 QRPPGQAPAQTTRA-EPGPWKILTMV--------------------------FTVLKGRPDFERG 252

  Fly   263 VAFVEYATPEDCESAMKHMDGGQIDGQEITVSPVVLVKQRPPMRRPS-----PPMRRPQNNRWRS 322
            .                        |..|...|:||   .|.....|     |..|..|::.|
Human   253 A------------------------GAWIRSKPLVL---HPGAGAGSGAGARPEERGVQSSHW-- 288

  Fly   323 PPQFNRFNNRGGG 335
            ||       .|||
Human   289 PP-------LGGG 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RnpS1	NP_649903.1	RRM	<196..>301	CDD:223796	17/104 (16%)
		RRM_RNPS1	221..294	CDD:240811	9/72 (13%)
PABPN1L	NP_001372638.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	21..66		8/20 (40%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	101..128		3/26 (12%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4209
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.900