Protein Alignment RnpS1 and SPBC13G1.14c

DIOPT Version :9

• Sequence 1: NP_649903.1
• Gene: RnpS1 / 41147
• FlyBaseID: FBgn0037707
• Length: 374
• Species: Drosophila melanogaster
• Sequence 2: NP_596549.2
• Gene: SPBC13G1.14c / 2539695
• PomBaseID: SPBC13G1.14c
• Length: 243
• Species: Schizosaccharomyces pombe
• Alignment Length: 215
• Identity: 64/215 - (29%)
• Similarity: 91/215 - (42%)
• Gaps: 50/215 - (23%)

  Fly   171 NNVKRERSRSASRSRSPRRRGRGSVERTPPPKRRERSRSRTRSPSPKQVRIHVGRLTRNVTKDHV 235
            ||.:....||||||.:...|   |..|......|..|.|.:|||......|.|..|||||||:|:
pombe    54 NNTRSPSGRSASRSSNFSHR---SSSRDSFSSNRSYSSSLSRSPEEPLRTILVENLTRNVTKEHI 115

  Fly   236 FEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHMDGGQIDGQEITVSPVVLVK 300
            .|||..:|.:.::..|:.: .....:|..::||...:...:|:..|:..::||:|:.||    :|
pombe   116 AEIFGIYGLIDHIFMPIYK-KSELNKGYCYIEYVYHDQAANAVDKMNNAELDGEELFVS----IK 175

  Fly   301 QRP------------PMRRPSPPMRRPQNNRWRSPPQFNRFNNRGGGGGGGGGRRQSPMRNRRSP 353
            :.|            ...|||    |.|||...:...|:|                     .|..
pombe   176 RFPFESLHKNHKHYENSYRPS----RSQNNSHYNDKSFHR---------------------SRYS 215

  Fly   354 RRRSRSPIRRRRRSNSSDSS 373
            |.|||||     .||.|:.|
pombe   216 RARSRSP-----GSNISEYS 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RnpS1	NP_649903.1	RRM	<196..>301	CDD:223796	32/104 (31%)
		RRM_RNPS1	221..294	CDD:240811	23/72 (32%)
SPBC13G1.14c	NP_596549.2	RRM	<94..243	CDD:223796	48/172 (28%)
		RRM_RNPS1	101..173	CDD:240811	23/72 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	57	1.000	Domainoid score	I3114
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0003226
OrthoInspector	1	1.000	-	-		otm47053
orthoMCL	1	0.900	-	-		OOG6_103512
Panther	1	1.100	-	-	LDO	PTHR15481
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1169
SonicParanoid	1	1.000	-	-		X3729
TreeFam	0	0.000	Not matched by this tool.
	7	7.030