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Protein Alignment RnpS1 and sgnh-1
DIOPT Version :9
Sequence 1: | NP_649903.1 |
Gene: | RnpS1 / 41147 |
FlyBaseID: | FBgn0037707 |
Length: | 374 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_500666.2 |
Gene: | sgnh-1 / 177260 |
WormBaseID: | WBGene00020354 |
Length: | 177 |
Species: | Caenorhabditis elegans |
Alignment Length: | 167 |
Identity: | 37/167 - (22%) |
Similarity: | 65/167 - (38%) |
Gaps: | 41/167 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 201 PKRRERSRSRTRSPSPKQVRIHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAF 265
|...|:.::..|| ::||.:....|...:.|.|:..|.|..|..|.|:| ..:.:..||
Worm 35 PTAEEQEKTDARS-------VYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKF-TGYQKNFAF 91
Fly 266 VEYATPEDCESAMKHMDGGQIDGQEITVSPVVLVKQ--RPPMRRPSPPMRRPQNNRWRSPPQFNR 328
||:...|..:.|:. :.|.....::| :|.:|: :|.|.|.:...: |..|.:
Worm 92 VEFQKLESVQLALV-LSGTMFRNRKI----MVTLKRTNKPGMGRTATAQK---------PAHFAK 142
Fly 329 FNNRGGGGGGGGGRRQ-----------SPMRNRRSPR 354
.:: |..|..| :|:...||.|
Worm 143 SSH------GKPGSHQGVTVVKYVYVNAPINGSRSKR 173
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4209 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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