DRSC/TRiP Functional Genomics Resources

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Protein Alignment RnpS1 and eif-3.G

DIOPT Version :10

Sequence 1:NP_649903.1 Gene:RnpS1 / 41147 FlyBaseID:FBgn0037707 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001263666.1 Gene:eif-3.G / 174346 WormBaseID:WBGene00001230 Length:262 Species:Caenorhabditis elegans


Alignment Length:73 Identity:19/73 - (26%)
Similarity:28/73 - (38%) Gaps:26/73 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   452 NGPIAADTKAVLNLMENGVQKNRTI------------HGMAAAD-----GDNTHVQ-------SL 492
            ||..||:|..|.|.:|  ::|:...            ||.:|.|     ..|...|       |.
 Worm     3 NGEKAAETVVVGNYVE--MEKDGKALDIKSKLSDMFWHGGSAYDAWFSCASNQVAQVLLTLPYSF 65

  Fly   493 SMIGNING 500
            |.:|.::|
 Worm    66 SQLGMLSG 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnpS1NP_649903.1 RRM_RNPS1 221..294 CDD:409800
eif-3.GNP_001263666.1 eIF3G 33..143 CDD:240597 10/41 (24%)
RRM_eIF3G_like 183..257 CDD:409842
Blue background indicates that the domain is not in the aligned region.

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