Protein Alignment RnpS1 and EEED8.4

DIOPT Version :9

• Sequence 1: NP_649903.1
• Gene: RnpS1 / 41147
• FlyBaseID: FBgn0037707
• Length: 374
• Species: Drosophila melanogaster
• Sequence 2: NP_495022.2
• Gene: EEED8.4 / 173921
• WormBaseID: WBGene00017135
• Length: 191
• Species: Caenorhabditis elegans
• Alignment Length: 181
• Identity: 41/181 - (22%)
• Similarity: 65/181 - (35%)
• Gaps: 46/181 - (25%)

  Fly   200 PPKRRERSRSRTRSPSPKQVRIHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRF---HPNFGR 261
            ||...|:.....:|       :.:|.:..|.|.:.:.|.|...|.:.....|.|:|   ..||
 Worm    43 PPTEEEQKAIDAKS-------VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNF-- 98

  Fly   262 GVAFVEYATPEDCESAMKHMDGGQIDGQEITVSPVVLVKQRPPMRRPSPPMRRPQNNRWRSPPQF 326
              |::|:......|:|:      .::|......|:|:..:|..:    |.|....
 Worm    99 --AYIEFDDSSSIENAL------VMNGSLFRSRPIVVTAKRTNI----PGMGHGV---------- 141

  Fly   327 NRFNNRGGGGGGGGGRRQSPMRNR---------RSPRRRSRSPIRRRRRSN 368
             |.::||..|.|.|..|.:|.|.:         ..|.|..|.  .|.||.|
 Worm   142 -RGSSRGTFGRGRGAARGAPGRQQTVVVKYVYVNGPNRGGRG--GRGRRFN 189

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RnpS1	NP_649903.1	RRM	<196..>301	CDD:223796	22/103 (21%)
		RRM_RNPS1	221..294	CDD:240811	16/75 (21%)
EEED8.4	NP_495022.2	RRM	<2..>127	CDD:223796	21/100 (21%)
		RRM_II_PABPs	56..128	CDD:240752	19/88 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4209
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900