Protein Alignment RnpS1 and Cirbp

DIOPT Version :10

• Sequence 1: NP_649903.1
• Gene: RnpS1 / 41147
• FlyBaseID: FBgn0037707
• Length: 374
• Species: Drosophila melanogaster
• Sequence 2: NP_001366350.1
• Gene: Cirbp / 12696
• MGIID: 893588
• Length: 176
• Species: Mus musculus
• Alignment Length: 141
• Identity: 36/141 - (25%)
• Similarity: 58/141 - (41%)
• Gaps: 32/141 - (22%)

  Fly   220 RIHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHMDGG 284
            ::.||.|:.:..:..:.::||.:|.:..|....|| .....||..||.:...:|.:.||..|:|.
Mouse     7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDR-ETQRSRGFGFVTFENIDDAKDAMMAMNGK 70

  Fly   285 QIDGQEITVSPVVLVKQRPPMRRPSPPMRRPQNNR--------------WRSPPQFNRFNNRGGG 335
            .:||::|.|...                .:..:||              :|......|..:||||
Mouse    71 SVDGRQIRVDQA----------------GKSSDNRSRGYRGGSAGGRGFFRGGRSRGRGFSRGGG 119

  Fly   336 GGG-GGGRRQS 345
            ..| ||||.:|
Mouse   120 DRGYGGGRFES 130

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RnpS1	NP_649903.1	RRM_RNPS1	221..294	CDD:409800	21/72 (29%)
Cirbp	NP_001366350.1	RRM_CIRBP_RBM3	6..85	CDD:409883	22/94 (23%)