DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mura and AT1G35625

DIOPT Version :10

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001319153.1 Gene:AT1G35625 / 840462 AraportID:AT1G35625 Length:318 Species:Arabidopsis thaliana


Alignment Length:184 Identity:43/184 - (23%)
Similarity:74/184 - (40%) Gaps:60/184 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   992 VQIQATSG--------------IINPGF--------LLNFLAMFPLSP------------YNQH- 1021
            |.:..|||              ::.|||        .:.|:::..:|.            ..|| 
plant   130 VLVTRTSGEVLKEYTSRAEMELLLIPGFGISSWSIMAITFVSLLVISAVLASYFSVRRHRIRQHV 194

  Fly  1022 -DLSSGDTNETENYEALLSLAERLGEAKPRGLTRNEIDQLPSYKFNPEVHNGDQS-SCVVCMCDF 1084
             ||..|                  |:...| :.::.:..:|:..:...:..|..| :|.:|:.|:
plant   195 RDLHHG------------------GQGHSR-MPKDLLQSMPTEVYTGVLEEGSTSVTCAICIDDY 240

  Fly  1085 ELRQLLRVLPCSHEFHAKCVDKWL-RSNRTCPICRGNASDYFDGVDQQQQSQAT 1137
            .:.::||:|||.|::||.|:|.|| |....||:|:.|..   .|.|....|:.|
plant   241 RVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCKQNPR---TGNDVPPASETT 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 19/46 (41%)
AT1G35625NP_001319153.1 PA_C_RZF_like 11..155 CDD:239038 4/24 (17%)
HRD1 <164..>291 CDD:227568 35/148 (24%)
RING-H2_RNF11 232..275 CDD:438131 18/42 (43%)

Return to query results.
Submit another query.