DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and AT5G43420

DIOPT Version :10

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_199155.1 Gene:AT5G43420 / 834362 AraportID:AT5G43420 Length:375 Species:Arabidopsis thaliana


Alignment Length:213 Identity:56/213 - (26%)
Similarity:82/213 - (38%) Gaps:77/213 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   955 SDRR------TFPPHRRIPRFWTANHGHRHVLPPQSLAAHQA-------PVQIQATSGIINPGFL 1006
            |:||      :|||                  ||.....|:|       |:...|..||:...||
plant     4 SNRRNPLRDLSFPP------------------PPPPPIFHRASSTGTSFPILAVAVIGILATAFL 50

  Fly  1007 L-----------------NFLAMFPLSPYNQHDLSSGDTNETENYEALLSLAERLGEAKPRGLTR 1054
            |                 :.|..|.||...::|           .:.|:..:.   |.:.|||..
plant    51 LVSYYVFVIKCCLNWHRIDILGRFSLSRRRRND-----------QDPLMVYSP---ELRSRGLDE 101

  Fly  1055 NEIDQLPSYKF------NPEVHNGD--------QSSCVVCMCDFELRQLLRVLP-CSHEFHAKCV 1104
            :.|..:|.:||      |..|..|:        ...|.||:.:|:..:.||::| |||.||..|:
plant   102 SVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCI 166

  Fly  1105 DKWLRSNRTCPICRGNAS 1122
            |.||::|..||:||...|
plant   167 DVWLQNNANCPLCRTRVS 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 19/53 (36%)
AT5G43420NP_199155.1 RING-H2_EL5-like 137..180 CDD:438124 19/42 (45%)
rad18 138..>300 CDD:273165 22/47 (47%)

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