DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mura and SDIR1

DIOPT Version :10

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_191112.1 Gene:SDIR1 / 824718 AraportID:AT3G55530 Length:273 Species:Arabidopsis thaliana


Alignment Length:265 Identity:64/265 - (24%)
Similarity:96/265 - (36%) Gaps:92/265 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   904 HAHQLPPGIHITPLSGAAAAAATHHLHST-------AAAAAAVAAGAQITTAQQILFSSDRRTFP 961
            ::||:||...:..:.|....|.|..:::|       |.|.||.|:|         |||       
plant    54 NSHQMPPNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASG---------LFS------- 102

  Fly   962 PHRRIPRFWTANHGHRHVLPPQSLAAHQAPVQIQATSGIINPGFLLNFLAMFPLSPYNQHDLSSG 1026
             |..:         ..||.|..:||..               |.|........|......||   
plant   103 -HTEL---------RLHVPPSIALATR---------------GRLQGLRLQLALLDREFDDL--- 139

  Fly  1027 DTNETENYEALLSLAERLGEAKPRGLTRNEIDQLPSYKF---NPEVHNG---------------- 1072
                  :||.|.:|..  .......::..||:.||.:|:   :||  ||                
plant   140 ------DYETLRALDS--DNVSTTSMSEEEINALPVHKYKVLDPE--NGCSLAKQASTSSSAEKM 194

  Fly  1073 ------------DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASDYF 1125
                        |:.:|.||:....:.:::|.|||.|:|||.|:|.|||...|||:|:..|...:
plant   195 LDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFRAHSGW 259

  Fly  1126 DGVDQ 1130
            ...|:
plant   260 QEQDE 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 20/44 (45%)
SDIR1NP_191112.1 RING-H2_PA-TM-RING 210..252 CDD:438118 19/41 (46%)

Return to query results.
Submit another query.