DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mura and AT3G02340

DIOPT Version :10

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_186883.1 Gene:AT3G02340 / 821090 AraportID:AT3G02340 Length:409 Species:Arabidopsis thaliana


Alignment Length:176 Identity:44/176 - (25%)
Similarity:72/176 - (40%) Gaps:35/176 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   970 WTANHGHRHVLPPQSLAA---------HQAPVQIQAT-SGIIN-----PGFLLN--------FLA 1011
            |||..|.........|::         |:...|:..| :.::|     .|.:||        :|.
plant   209 WTAFSGPEDEDEEDELSSLSRDDEEEDHELDWQVLLTVNNVVNYIEQAEGIMLNPDDIDPDYYLY 273

  Fly  1012 MFPLSPYNQHDLSSGDTNETENYEALLSLAERL-GEAKPRG---LTRNEIDQLPSYKFNPEVHNG 1072
            :..|..:        |.|.:.:|:|...|.:.. .|...||   ..::.|..||..:...|..:.
plant   274 LSGLDEF--------DENHSGHYDADAILGQMFDDETGIRGNPPAAKSVIQDLPVVELAVEELDK 330

  Fly  1073 DQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICR 1118
            ..:.|.||..:..:.:.:|.|||||.:|.:|:..||....|||:||
plant   331 GNNVCAVCKDEMLVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCR 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 16/44 (36%)
AT3G02340NP_186883.1 RING_Ubox 335..376 CDD:473075 16/40 (40%)

Return to query results.
Submit another query.