DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and Rnf6

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001243015.1 Gene:Rnf6 / 74132 MGIID:1921382 Length:678 Species:Mus musculus


Alignment Length:741 Identity:155/741 - (20%)
Similarity:245/741 - (33%) Gaps:199/741 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   489 PAQSRDYSGNGNGNNNGHGHNGRRYMSDNLNNPSSSMNGLIN--SGHHQRNYNDRNLNNHFGNSE 551
            |::||  || |:|..:....|.||:..:.|:...:... .||  |....|...|.||   .|...
Mouse    14 PSRSR--SG-GSGEESSFQENERRWQQERLHREEAYYQ-FINELSDEDYRLMRDHNL---LGTPG 71

  Fly   552 QNGGPDHRDRAEGSSYNFMRNGGGSGGGGYG----------------------RNGSHYQHMAYG 594
            :....:.:.|.|.:........|.......|                      |.|:..:....|
Mouse    72 EITSEELQQRLERAKEQLASQPGSDSAASDGDSESLRAHSDEDSLLRWLNTFRRTGNVTRSGQNG 136

  Fly   595 NNNGASTSTGGPGLMGELPSGSGLSGSSLSLNNGPGGLNSDSPSRKRRRISGRPPNGPQPQHRCP 659
            |.:..:.|...|        .||..|.||.::..|....|:........|   |.:|...:||  
Mouse   137 NQSWRAVSRTNP--------NSGEFGFSLEIHINPDNRGSEMHGEDSTDI---PLSGVNREHR-- 188

  Fly   660 MAHMQQGSPPLRRPRLRDVATSTQQQQQQYGHQVHHPQQQQQQPPSNYHPMHHHQPQPHYVPQQQ 724
              ..:..||..||.|.:...:|:..:    |.:....|...|...:....:.:.......||:..
Mouse   189 --QQRPSSPVARRTRSQTSMSSSGPR----GRRGARRQGSVQGSFATLGRLRNGIGVALGVPRVS 247

  Fly   725 VPPPHVQRSPWDLGSSGGSSGGATSSSSVGPILQQVQAPPQPPSHQQAVGYPQAPPQPASLMVDL 789
            .|..:|      :.|....|.|:|        |:|        ..:|..|........|...|.:
Mouse   248 APRTNV------INSHTNQSDGST--------LRQ--------GGRQRFGAAHIWENGARSNVTV 290

  Fly   790 -NLNQVPVNLQLRPSEPFWASFCTYPIPAQARLAPCHLHGVYTQPFPAAPPPGLAAPPLQQQHQP 853
             |.||....::|||:   ::|....||  |.:....| |....|           ..|:||..:.
Mouse   291 RNTNQRLEPIRLRPA---FSSRSRSPI--QRQNGTVH-HNSQRQ-----------GRPVQQTGRN 338

  Fly   854 LIQAQQMISQATLTAQQQQR--DVVAIATANLG---PIEAPGAHGHPHAHPHAHP------HAHQ 907
            .....:.:::..|...::.|  |...::.:.|.   .:| .|......|....||      ...:
Mouse   339 RSVRHRGVTRVFLEQGREHRGTDYTPLSNSRLVSRITVE-EGESSRSSAATQRHPAITLDLQVRR 402

  Fly   908 LPPG-----IHITPLSGAAAAAATHHLHSTAAAAAAVAAGAQITTAQQILFSSDRRTF-----PP 962
            :.||     ..|...:.:.|..|...:.||       :.|...|.:.  |..|..||:     .|
Mouse   403 IRPGETRDRDSIANRTRSRAGLAESTVEST-------SGGFHRTISH--LERSGVRTYVSTITVP 458

  Fly   963 HRRIPRFWTANHGHRHVLPPQSLAAHQAPVQIQATSGIINPGFLLNFLAMFPLS----------- 1016
            .|||        ....|:.|.|:|......||.  :|.   |.|.:.:.:.|.|           
Mouse   459 LRRI--------SENDVVEPSSVALRSILRQIM--TGF---GELSSLMEVEPASENQSNGQRLPE 510

  Fly  1017 ------------PYNQHDLSSGDTNETENYEALLSLAE---------------RLGEAKP----- 1049
                        ...||..:|...::.::...:|::.|               :||.|..     
Mouse   511 VYLELSNGDAADDSGQHGRASSQASQAQDGAEMLAVREPAPPQARPSGSRSRRQLGRADSVVEAG 575

  Fly  1050 ---------------------RGLTRNEIDQLPSYKFNPEVHNGDQSS-CVVCMCDFELRQLLRV 1092
                                 ||||:.:||.|.:..:..:..:.:... |.||:.|:.....||.
Mouse   576 TLPILRLAHFFLLNEGDDDPIRGLTKEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQ 640

  Fly  1093 LPCSHEFHAKCVDKWLRSNRTCPICR 1118
            |||.||||..|:|:||..|.|||:||
Mouse   641 LPCLHEFHIHCIDRWLSENCTCPVCR 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 21/42 (50%)
Rnf6NP_001243015.1 zf-RING_2 625..666 CDD:290367 21/40 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.880

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