DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and Rnf38

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_011248417.2 Gene:Rnf38 / 73469 MGIID:1920719 Length:623 Species:Mus musculus


Alignment Length:671 Identity:203/671 - (30%)
Similarity:260/671 - (38%) Gaps:223/671 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   556 PDH---RDRAEGSSYNFMRNGGGSGGGGYGRNGSHYQHMAYGNNNGASTSTGGPGLMGE------ 611
            |.|   |..|:|........|.||.|..:.....|:.|:.:.:::..|.......|.|.      
Mouse    67 PGHGPLRSGAQGVGACGRAPGAGSVGASFQCQSIHHDHICHDDSDKISPGANSAPLPGHPNKVIC 131

  Fly   612 -----------LPSGSGLSGSSLSLNNGPGGLNSDSPSRKRRRIS------------GRPPNGP- 652
                       |||....:... ..:......:.||||.||:|:|            ..||..| 
Mouse   132 ERVRLQSLFPLLPSDQNTTIQE-DAHFKAFFQSEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPW 195

  Fly   653 ------QP------QH-----RCPMAHMQQGSPPLRRPRLRDVATSTQ---QQQQQYGHQVHHPQ 697
                  ||      ||     ||......:.|||:||.|.|....|..   .|.:.| |.:.:.|
Mouse   196 EMTSNRQPPSVRPNQHHFSGERCNTPARNRRSPPVRRQRGRRERLSRHNSISQDENY-HHLPYAQ 259

  Fly   698 QQQQQPPSNYHP-------MH--HHQPQ---------------------------PHYVP---QQ 723
            ||..:.|..:||       :|  .|.||                           ||.:|   .|
Mouse   260 QQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGLPLCTGQ 324

  Fly   724 QVPPPHVQRSPWDLGSSGGSSGGATSSSSVGPILQQ---VQAPPQPPSHQQAVGYPQAPPQPASL 785
            .:|....|:.|   |.|...||......||.|.:.|   ||..|.|        |...||     
Mouse   325 HIPACSTQQVP---GCSVVFSGQHLPVCSVPPPMLQACSVQHLPVP--------YAAFPP----- 373

  Fly   786 MVDLNLNQVPVNLQLRPSEPFWASFCTYPIPAQARLAPCHLHGVYTQPFPAAPPPGLAAP-PLQQ 849
                          |..|:|    |..:|    ..|:|.|       | |..||||...| ..||
Mouse   374 --------------LISSDP----FLIHP----PHLSPHH-------P-PHLPPPGQFVPFQTQQ 408

  Fly   850 QHQPLIQAQQMISQATLTAQQQQRDVVAIATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHI 914
            ...||   |::.::..|..:..|                .|:..:|   |.|||..  |||.   
Mouse   409 SRSPL---QRIENEVELLGEHLQ----------------VGSFTYP---PSAHPPT--LPPS--- 446

  Fly   915 TPLSGAAAAAATHH-LHSTAAAAAAVAAGAQITTAQQILFSSDRRTFPPHRRIPRFWTANHGHRH 978
            .||.     ..||. ||                  |::.|......|.|.|...|   :.:..:.
Mouse   447 APLQ-----FLTHDPLH------------------QEVSFGVPYPPFMPRRLTGR---SRYRSQQ 485

  Fly   979 VLPPQSLAAHQAPVQIQATSGIINPGFLLNFLAMFPLSP------YNQHDLSSGDTNETENYEAL 1037
            .:||..                .:|..|...|:|.|:.|      ..:.|:..|   |.||||||
Mouse   486 PMPPPP----------------YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDG---EVENYEAL 531

  Fly  1038 LSLAERLGEAKPRGLTRNEIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAK 1102
            |:||||||||||||||:.:|:|||||:|||..|..:|:.|||||||||.|||||||||:||||||
Mouse   532 LNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAK 596

  Fly  1103 CVDKWLRSNRTCPICRGNASD 1123
            ||||||:.||||||||.:||:
Mouse   597 CVDKWLKGNRTCPICRADASE 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 36/41 (88%)
Rnf38XP_011248417.2 RING-H2_RNF38_like 568..612 CDD:319386 37/43 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 93 1.000 Domainoid score I7551
eggNOG 1 0.900 - - E33208_3BGBB
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003478
OrthoInspector 1 1.000 - - otm43639
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46171
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R768
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.900

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