DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mura and Rnf133

DIOPT Version :10

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001037743.1 Gene:Rnf133 / 681395 RGDID:1596695 Length:381 Species:Rattus norvegicus


Alignment Length:128 Identity:36/128 - (28%)
Similarity:56/128 - (43%) Gaps:20/128 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1040 LAERLGEAKPRGLTRNEIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCV 1104
            |.:..|:.:.|.|...:.:..|         |.|  |||:|...::..:::|:|.|.|.||..|:
  Rat   230 LKKAFGQLQVRILKEGDEEVSP---------NAD--SCVICFEAYKPNEIVRILTCKHFFHKNCI 283

  Fly  1105 DKWLRSNRTCPICR-------GNASDYFDGVDQQQ--QSQATAGAAAALSGTSGGSAGVAGTS 1158
            |.|:.::.|||:|:       |...|..||.|..|  .|....|..:|:..........|.||
  Rat   284 DPWILAHGTCPMCKCDILKALGIQMDIEDGSDSLQVLMSNELPGTFSAMEEELNNELPPARTS 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 17/44 (39%)
Rnf133NP_001037743.1 PA_GRAIL_like 43..177 CDD:239037
HRD1 <183..>368 CDD:227568 36/128 (28%)
RING-H2_RNF128-like 254..302 CDD:438454 18/49 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..381 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.