DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and Rnf133

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001037743.1 Gene:Rnf133 / 681395 RGDID:1596695 Length:381 Species:Rattus norvegicus


Alignment Length:128 Identity:36/128 - (28%)
Similarity:56/128 - (43%) Gaps:20/128 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1040 LAERLGEAKPRGLTRNEIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCV 1104
            |.:..|:.:.|.|...:.:..|         |.|  |||:|...::..:::|:|.|.|.||..|:
  Rat   230 LKKAFGQLQVRILKEGDEEVSP---------NAD--SCVICFEAYKPNEIVRILTCKHFFHKNCI 283

  Fly  1105 DKWLRSNRTCPICR-------GNASDYFDGVDQQQ--QSQATAGAAAALSGTSGGSAGVAGTS 1158
            |.|:.::.|||:|:       |...|..||.|..|  .|....|..:|:..........|.||
  Rat   284 DPWILAHGTCPMCKCDILKALGIQMDIEDGSDSLQVLMSNELPGTFSAMEEELNNELPPARTS 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 16/41 (39%)
Rnf133NP_001037743.1 PA_GRAIL_like 43..177 CDD:239037
HRD1 <183..>368 CDD:227568 36/128 (28%)
RING-H2_RNF128_like 254..302 CDD:319716 18/49 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..381 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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