DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and Rnf130

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_038942740.1 Gene:Rnf130 / 652955 RGDID:1562041 Length:439 Species:Rattus norvegicus


Alignment Length:331 Identity:68/331 - (20%)
Similarity:107/331 - (32%) Gaps:129/331 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   821 LAPCHLHGVYTQPFPAAPPPGLAAPPLQQQHQPLIQA-----QQMISQATLTAQQQQRDVVAIAT 880
            |||..:||| .......|......||..:|...|:|.     ::.||:|..      .:.||:..
  Rat    75 LAPLPIHGV-ADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKISRAAF------HNAVAVVI 132

  Fly   881 ANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHITPLSGAAAAAATHHLHSTAAAAAAVAAGAQI 945
            .|....|.|....||......         .:.||.|.|....:   :|....:....:|.|.: 
  Rat   133 YNNKSKEEPVTMTHPGTGDII---------AVMITELRGKDILS---YLEKNISVQMTIAVGTR- 184

  Fly   946 TTAQQILFSSDRRTFPPHRRIPRFWTANHGHRHVLPPQSLAAHQAPVQIQATSGIINPGFL---- 1006
                                              :||::.:.                |.|    
  Rat   185 ----------------------------------MPPKNFSR----------------GSLVFVS 199

  Fly  1007 LNFLAMFPLSP------------YNQHDLSSGDTNETENYEALLSLAERLGEAKPRGL----TRN 1055
            ::|:.:..:|.            |.    ::.|.|:           .|||:|..:.:    ||.
  Rat   200 ISFIVLMIISSAWLIFYFIQKIRYT----NARDRNQ-----------RRLGDAAKKAISKLTTRT 249

  Fly  1056 EIDQLPSYKFNPEVHNGDQSS------CVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTC 1114
                         |..||:.:      |.||:..::...::|||||.|.||..|||.||..:.||
  Rat   250 -------------VKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTC 301

  Fly  1115 PICRGN 1120
            |:|:.|
  Rat   302 PMCKLN 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 19/47 (40%)
Rnf130XP_038942740.1 PA_GRAIL_like 40..179 CDD:239037 27/122 (22%)
HRD1 <197..366 CDD:227568 35/139 (25%)
RING-H2_RNF130 262..310 CDD:319717 21/46 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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