DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and rnf38

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_012819095.2 Gene:rnf38 / 594927 XenbaseID:XB-GENE-1015605 Length:736 Species:Xenopus tropicalis


Alignment Length:835 Identity:224/835 - (26%)
Similarity:298/835 - (35%) Gaps:313/835 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 SSASSMLPQQQQHQINNA-SAP-------INSHSQGQGPGNSPNLGHNHQRGYNNGNNNRGIGNG 468
            |:|||..||....|:..| |:|       ::|||....|..:|:..|                  
 Frog    86 SAASSSSPQHPLLQVTTAFSSPSFYQSFSVSSHSTSPSPPTAPSFLH------------------ 132

  Fly   469 IVNGNTNGPPDYMNYRRGVCPAQSRDYSGNGNGNNNGHGHNGRRYMSDNLNNPSSSMNGLINSGH 533
                     |.::.      |.::|..|...:|           :|.:........|.|..:..|
 Frog   133 ---------PVFLE------PPRTRSRSTCRSG-----------FMMNQQQQQLHGMPGAAHFPH 171

  Fly   534 HQ-----------------RNYN-DRNLNNHFGNSEQNGGPDHRDRAEGSSYNFMRNGGGSGGGG 580
            ||                 |..| |||.:.....:.|...|...              ||...|.
 Frog   172 HQLQTPQQPPPPLLFPSALRGINMDRNDSRPPEGARQPHSPPAL--------------GGRRRGN 222

  Fly   581 YGRNGSHYQHMAYGNNNGASTSTGGPGLMGELPSGSGLSGSSLS--------LNNGPGGLNSDSP 637
            ...|.||.||.                   .:.|.:|..|.|..        :.|.....|.|||
 Frog   223 SPNNSSHNQHQ-------------------HMRSPAGNMGPSFQCQPVHQDHICNDDSEKNEDSP 268

  Fly   638 SRKRRRISG-------------------------RPPNGPQPQH-----RCPMAHMQQGSPPLRR 672
            |.||:|:|.                         |||:....||     ||......:.|||:||
 Frog   269 SPKRQRLSNSVFEYAAASPAPSPPMRPWEMTSNRRPPSARPHQHHFSGERCNTPARNRRSPPVRR 333

  Fly   673 PRLRDVATSTQ---QQQQQYGHQVHHPQQQQQQPPSNYHPMHHHQPQPHYVPQQQVPPPHVQRSP 734
            .|.|....|..   .|.:.| |.:.:.|||..:.|..:||       |:..|:...|..|     
 Frog   334 QRGRRERLSRHNSISQDENY-HHLSYGQQQAVEEPRAFHP-------PNVSPRMLHPAAH----- 385

  Fly   735 WDLGSSGGSSGGATSSSSVGPILQQVQAPPQPPSHQQAVGYPQAPPQPASLMVDLN--LNQ--VP 795
                                                        |||..::|||::  ::|  ||
 Frog   386 --------------------------------------------PPQQNAVMVDIHEQIHQGTVP 406

  Fly   796 VNLQLRPSEPFWASFCT---YPIPAQARLAPC-------HLHGVYTQPFPAAPPPGLAAPPLQQQ 850
            |:..:....|.....||   .|..:..::..|       ||      |..:.|||.:.|..:|..
 Frog   407 VSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHL------PVCSVPPPMIQACSVQHL 465

  Fly   851 HQPLIQAQQMISQATLTAQQQQRDVVAIATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPG---- 911
            ..|......:||.....               |.|         ||..|| | |||..|||    
 Frog   466 PVPYAAFPPLISSDPFL---------------LHP---------PHLSPH-H-HAHLPPPGQFVP 504

  Fly   912 -----------IHITPLSGA-----AAAAATHHL--------HSTAAAAAAVAAGAQITT----A 948
                       :|.:||...     .......||        .|..|.....:|..|..|    .
 Frog   505 FQTQQSRSESNLHNSPLQPLQRIENEVELLGEHLPVGGFTYPPSAHAPTLQPSAPLQFITHDPLH 569

  Fly   949 QQILFSSDRRTFPPHRRIPRFWTANHGHR--HVLPPQSLAAHQAPVQIQATSGIINPGFLLNFLA 1011
            |::.|..   .:||.  :||..|..:.:|  ..:||..                .:|..|...|:
 Frog   570 QEVSFGV---PYPPF--MPRRITGRNRYRSQQPIPPPP----------------YHPSLLPYVLS 613

  Fly  1012 MFPLSP------YNQHDLSSGDTNETENYE--ALLSLAERLGEAKPRGLTRNEIDQLPSYKFNPE 1068
            |.|:.|      ..:.|:..|   |.||||  |||:||||||||||||||:.:|:|||||:|||.
 Frog   614 MLPVPPTVGPAFSFELDVEDG---EVENYEVGALLNLAERLGEAKPRGLTKADIEQLPSYRFNPN 675

  Fly  1069 VHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 1123
            .|..:|:.|||||||||.|||||||||:||||||||||||::||||||||.:||:
 Frog   676 NHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 36/41 (88%)
rnf38XP_012819095.2 RING-H2_RNF38 680..728 CDD:319593 39/47 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 94 1.000 Domainoid score I7361
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003478
OrthoInspector 1 1.000 - - otm48805
Panther 1 1.100 - - O PTHR46171
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R768
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.130

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