DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and rnf38

DIOPT Version :10

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_012819095.2 Gene:rnf38 / 594927 XenbaseID:XB-GENE-1015605 Length:736 Species:Xenopus tropicalis


Alignment Length:835 Identity:224/835 - (26%)
Similarity:298/835 - (35%) Gaps:313/835 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 SSASSMLPQQQQHQINNA-SAP-------INSHSQGQGPGNSPNLGHNHQRGYNNGNNNRGIGNG 468
            |:|||..||....|:..| |:|       ::|||....|..:|:..|                  
 Frog    86 SAASSSSPQHPLLQVTTAFSSPSFYQSFSVSSHSTSPSPPTAPSFLH------------------ 132

  Fly   469 IVNGNTNGPPDYMNYRRGVCPAQSRDYSGNGNGNNNGHGHNGRRYMSDNLNNPSSSMNGLINSGH 533
                     |.::.      |.::|..|...:|           :|.:........|.|..:..|
 Frog   133 ---------PVFLE------PPRTRSRSTCRSG-----------FMMNQQQQQLHGMPGAAHFPH 171

  Fly   534 HQ-----------------RNYN-DRNLNNHFGNSEQNGGPDHRDRAEGSSYNFMRNGGGSGGGG 580
            ||                 |..| |||.:.....:.|...|...              ||...|.
 Frog   172 HQLQTPQQPPPPLLFPSALRGINMDRNDSRPPEGARQPHSPPAL--------------GGRRRGN 222

  Fly   581 YGRNGSHYQHMAYGNNNGASTSTGGPGLMGELPSGSGLSGSSLS--------LNNGPGGLNSDSP 637
            ...|.||.||.                   .:.|.:|..|.|..        :.|.....|.|||
 Frog   223 SPNNSSHNQHQ-------------------HMRSPAGNMGPSFQCQPVHQDHICNDDSEKNEDSP 268

  Fly   638 SRKRRRISG-------------------------RPPNGPQPQH-----RCPMAHMQQGSPPLRR 672
            |.||:|:|.                         |||:....||     ||......:.|||:||
 Frog   269 SPKRQRLSNSVFEYAAASPAPSPPMRPWEMTSNRRPPSARPHQHHFSGERCNTPARNRRSPPVRR 333

  Fly   673 PRLRDVATSTQ---QQQQQYGHQVHHPQQQQQQPPSNYHPMHHHQPQPHYVPQQQVPPPHVQRSP 734
            .|.|....|..   .|.:.| |.:.:.|||..:.|..:||       |:..|:...|..|     
 Frog   334 QRGRRERLSRHNSISQDENY-HHLSYGQQQAVEEPRAFHP-------PNVSPRMLHPAAH----- 385

  Fly   735 WDLGSSGGSSGGATSSSSVGPILQQVQAPPQPPSHQQAVGYPQAPPQPASLMVDLN--LNQ--VP 795
                                                        |||..::|||::  ::|  ||
 Frog   386 --------------------------------------------PPQQNAVMVDIHEQIHQGTVP 406

  Fly   796 VNLQLRPSEPFWASFCT---YPIPAQARLAPC-------HLHGVYTQPFPAAPPPGLAAPPLQQQ 850
            |:..:....|.....||   .|..:..::..|       ||      |..:.|||.:.|..:|..
 Frog   407 VSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHL------PVCSVPPPMIQACSVQHL 465

  Fly   851 HQPLIQAQQMISQATLTAQQQQRDVVAIATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPG---- 911
            ..|......:||.....               |.|         ||..|| | |||..|||    
 Frog   466 PVPYAAFPPLISSDPFL---------------LHP---------PHLSPH-H-HAHLPPPGQFVP 504

  Fly   912 -----------IHITPLSGA-----AAAAATHHL--------HSTAAAAAAVAAGAQITT----A 948
                       :|.:||...     .......||        .|..|.....:|..|..|    .
 Frog   505 FQTQQSRSESNLHNSPLQPLQRIENEVELLGEHLPVGGFTYPPSAHAPTLQPSAPLQFITHDPLH 569

  Fly   949 QQILFSSDRRTFPPHRRIPRFWTANHGHR--HVLPPQSLAAHQAPVQIQATSGIINPGFLLNFLA 1011
            |::.|..   .:||.  :||..|..:.:|  ..:||..                .:|..|...|:
 Frog   570 QEVSFGV---PYPPF--MPRRITGRNRYRSQQPIPPPP----------------YHPSLLPYVLS 613

  Fly  1012 MFPLSP------YNQHDLSSGDTNETENYE--ALLSLAERLGEAKPRGLTRNEIDQLPSYKFNPE 1068
            |.|:.|      ..:.|:..|   |.||||  |||:||||||||||||||:.:|:|||||:|||.
 Frog   614 MLPVPPTVGPAFSFELDVEDG---EVENYEVGALLNLAERLGEAKPRGLTKADIEQLPSYRFNPN 675

  Fly  1069 VHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 1123
            .|..:|:.|||||||||.|||||||||:||||||||||||::||||||||.:||:
 Frog   676 NHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 37/44 (84%)
rnf38XP_012819095.2 RING-H2_RNF38 662..728 CDD:438341 49/65 (75%)

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