DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mura and rnf115b

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_003200594.1 Gene:rnf115b / 563879 ZFINID:ZDB-GENE-060503-608 Length:301 Species:Danio rerio


Alignment Length:157 Identity:42/157 - (26%)
Similarity:70/157 - (44%) Gaps:36/157 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   993 QIQATSGIINPGFLLNFLAMFPLSPYNQHDLSSGDTNETENYEALLS----------------LA 1041
            |.||..||:.     .|||    ..::..| |:|.  :|.::.:.|.                :.
Zfish   135 QGQAVEGIVQ-----QFLA----GLFSNSD-SAGP--QTSSWSSALHSNPGDYAWGQGGLDAVVT 187

  Fly  1042 ERLGEAK---PRGLTRNEIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKC 1103
            :.||:::   |....:..|..||:...:.| ....:..|.||..:|.:.:.:|.|||.|.||:.|
Zfish   188 QLLGQSENSGPPPAEKEMISSLPTVSISSE-QAACRLECPVCREEFSVGESVRQLPCLHYFHSSC 251

  Fly  1104 VDKWLRSNRTCPICRGNASDYFDGVDQ 1130
            :..||:.:.|||:||.:    .||.|:
Zfish   252 IVPWLQLHDTCPVCRKS----LDGEDR 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 17/41 (41%)
rnf115bXP_003200594.1 zinc_ribbon_9 11..41 CDD:291067
zf-RING_2 224..266 CDD:290367 17/41 (41%)
RING <250..288 CDD:302633 11/29 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.