DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and rnf130

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_009289393.1 Gene:rnf130 / 553950 ZFINID:ZDB-GENE-050522-525 Length:428 Species:Danio rerio


Alignment Length:199 Identity:48/199 - (24%)
Similarity:82/199 - (41%) Gaps:61/199 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1001 INPGFL----LNFLAMFPLSP--------YNQHDLSSGDTNETENYEALLSLAERLGEAKPRGL- 1052
            ||.|.|    ::|:.:..:|.        ....|.|:.|.::           .|||:|..:.: 
Zfish   199 INRGSLVFVSISFIVLMIISSAWLIFYFIQKIRDTSARDRSQ-----------RRLGDAAKKAIS 252

  Fly  1053 ---TRNEIDQLPSYKFNPEVHNGDQSS------CVVCMCDFELRQLLRVLPCSHEFHAKCVDKWL 1108
               ||.             |..||:.:      |.||:..::|..::|:|||.|.||..|||.||
Zfish   253 KLTTRT-------------VKRGDKETEPDFNHCAVCIEGYQLNDVVRILPCKHVFHKMCVDPWL 304

  Fly  1109 RSNRTCPICRGNA--------------SDYFDGVDQQQQSQATAGAAAALSGTSGGSAGVAGTSE 1159
            ..:.|||:|:.|.              :..|| :|:..:||.::...|.:..:|..|..:.....
Zfish   305 NEHCTCPMCKLNILKALGVMPNLPCVDNMAFD-MDRMSRSQTSSQRTALVDLSSETSISLEPLRH 368

  Fly  1160 ASAA 1163
            :|::
Zfish   369 SSSS 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 19/47 (40%)
rnf130XP_009289393.1 PA_GRAIL_like 49..188 CDD:239037
zf-RING_2 271..314 CDD:290367 19/42 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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