DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and chmp3

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_002937319.1 Gene:chmp3 / 548983 XenbaseID:XB-GENE-1005141 Length:681 Species:Xenopus tropicalis


Alignment Length:70 Identity:27/70 - (38%)
Similarity:39/70 - (55%) Gaps:10/70 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1053 TRNEIDQLPSYKFNPEVHNGDQ---SSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNR-T 1113
            |:|:::  |::...|    |:.   :.||||:.:||...||..|||.|.||..|:..||...| .
 Frog   597 TKNDME--PNWASWP----GNMLHCTECVVCLENFENGSLLMGLPCGHVFHQNCIVMWLAGGRHC 655

  Fly  1114 CPICR 1118
            ||:||
 Frog   656 CPVCR 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 20/42 (48%)
chmp3XP_002937319.1 RING-H2_RNF103 617..661 CDD:319387 22/44 (50%)
RING-H2 finger (C3H2C3-type) 618..659 CDD:319387 20/40 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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