DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and rlim

DIOPT Version :10

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001016091.1 Gene:rlim / 548845 XenbaseID:XB-GENE-492020 Length:639 Species:Xenopus tropicalis


Alignment Length:661 Identity:142/661 - (21%)
Similarity:214/661 - (32%) Gaps:209/661 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 GNSEQNGGPDHRDRAEGSS----YNFMRNGGGSGGGGYGRNGSHYQHMAYGNNNG---------A 599
            |:.....|....|.:.|.|    .|.:|..|.:...|...|.|.........|:|         .
 Frog    85 GDPVSASGDPAEDSSNGDSIIDWLNSVRQTGNTTRSGQRGNQSWRAVSRTNPNSGDFRFSLEINV 149

  Fly   600 STSTGGPGL-----MGELPSGSGLSGSSLSLN-NGP---------GGLNSDSP-SRKRRRISGRP 648
            :.::|.|.:     ..|:|....:..||...| |.|         ..:..::| .|.:||...|.
 Frog   150 NRTSGNPSMPSLEQSSEMPGAEDMEVSSQGENENEPEPVAPRVAQAEVTEEAPVQRGQRRARSRS 214

  Fly   649 PNGPQPQHRCPMAHM---QQGSPPLRRPR---LRDVATSTQQQQQQYGHQVHHPQQQQQQPPSNY 707
            |:..:.:.|...:..   |...||:||.:   .:.|..|:.::.:......||...|.|...|:.
 Frog   215 PDQRRTRARTDRSRSPLHQAVEPPIRRAQHSSSQTVDASSTEEAEGSSRTRHHVSSQMQNSSSSN 279

  Fly   708 HPMHHHQPQPHYVPQQQVPPPHVQRSPWDLGSSGGS-SGGATSSSSVGPILQQVQA--------- 762
            ......:.:.|...:||.           ||:.|.| |...|.|.|......|.|:         
 Frog   280 ETEGSSRTRQHITARQQA-----------LGTEGQSQSQTQTQSQSQTQTQSQTQSQSTVHLSNP 333

  Fly   763 -------PPQPPSHQQA--VGYPQAPPQPASLMVDLNLNQVPVNLQLRPSEPFWASFCTYPIPAQ 818
                   |||..|...|  .|..|.||   ::::||.:.:|      ||                
 Frog   334 ESRSSSQPPQTDSSSNAETTGTGQRPP---TIVLDLQVRRV------RP---------------- 373

  Fly   819 ARLAPCHLHGVYTQPFPAAPPPGLAAPPLQQQHQPLIQAQQMISQATLTAQQQQRDVVAIATANL 883
                     |.|.|                         :..|:..|.:..|...:.|...:...
 Frog   374 ---------GDYRQ-------------------------RDSIANRTRSRSQTPNNTVTYESERG 404

  Fly   884 G------PIEAPGAHGHPHAHPHAHPHAHQLP-PGIHITPLSGAAAAAATHHLHSTAAAAAAVAA 941
            |      ..|..|.        ..:....::| ..|..|.||...:.|....|.           
 Frog   405 GFRRTFSRSERAGV--------RTYVSTIRIPIRRILNTGLSETTSVAIQTMLR----------- 450

  Fly   942 GAQITT--AQQILFSSDRRTFPPHRRIPRFWTANHGHRHVLPP-------QSLAAHQAPVQIQAT 997
              ||.|  .:...|..:.....|:...|           |.||       |:|.:.:.|      
 Frog   451 --QIMTGFGELSYFMYNDNDTDPNNPTP-----------VSPPAAVPGEAQNLVSPEPP------ 496

  Fly   998 SGIINPGFLLNFLAMFPLSPYNQHDLSS---------------GDTNETENYEALLSLAERL--- 1044
            :.|:.|        ..|::|....:.|:               |.|.|.......||||:..   
 Frog   497 APIVEP--------PEPVAPVESEEGSNVSTSSARREGRNSRGGVTFEESGSLPFLSLAQFFLLN 553

  Fly  1045 --GEAKPRGLTRNEIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKW 1107
              .:.:|||||:.:||.|.:..|.   .|....:|.||:.::.....||.||||||:|..|:|:|
 Frog   554 EDDDDQPRGLTKEQIDNLSTRNFG---ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRW 615

  Fly  1108 LRSNRTCPICR 1118
            |..|.||||||
 Frog   616 LSENSTCPICR 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 21/44 (48%)
rlimNP_001016091.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 67..403 75/387 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 467..534 14/91 (15%)
RING-H2_RNF12 583..633 CDD:438336 23/44 (52%)
PDZ-binding. /evidence=ECO:0000255 636..639
Blue background indicates that the domain is not in the aligned region.

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