DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and Rnf149

DIOPT Version :10

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001418215.1 Gene:Rnf149 / 363222 RGDID:1308460 Length:394 Species:Rattus norvegicus


Alignment Length:203 Identity:52/203 - (25%)
Similarity:88/203 - (43%) Gaps:31/203 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   975 GHRHVLPPQSLAAHQAPVQIQ---ATSGIINPGFLLNFLAMFPLSPYNQHDLSSGDTNETENYEA 1036
            |.||:   |...:.|:.|.:.   .|..||:..:|:.:        |.|..|.:|....::|:  
  Rat   184 GTRHM---QEFISGQSVVFVAIAFITMMIISLAWLIFY--------YIQRFLYTGSQFGSQNH-- 235

  Fly  1037 LLSLAERLGEAKPRGLTRNEIDQLP--SYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEF 1099
                         |..|:..|.|||  :.|...:..:.|..:|.||:.:|:::.::|:|||.|.|
  Rat   236 -------------RKETKKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIF 287

  Fly  1100 HAKCVDKWLRSNRTCPICRGNASDYFDGVDQQQQSQATAGAAAALSGTSGGSAGVAGTSEASAAT 1164
            |..|:|.||..:||||:|:.:...........:.:|......||....|.|:..|....|..:.:
  Rat   288 HRICIDPWLLDHRTCPMCKLDVIKALGYWGDPEDAQDLPIPEAAPGSVSVGNLSVTVQDEERSES 352

  Fly  1165 ANPQQSQA 1172
            ..|..|.:
  Rat   353 NLPSSSSS 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 20/44 (45%)
Rnf149NP_001418215.1 PA_GRAIL_like 45..181 CDD:239037
RING-H2_RNF149 264..311 CDD:438455 20/46 (43%)
Blue background indicates that the domain is not in the aligned region.

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