DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and Rnf44

DIOPT Version :10

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_006253695.1 Gene:Rnf44 / 361212 RGDID:1307212 Length:433 Species:Rattus norvegicus


Alignment Length:558 Identity:173/558 - (31%)
Similarity:224/558 - (40%) Gaps:176/558 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   594 GNNNGASTSTGGPG-LMGELPSGSGLSGSSLSLNNGPGGLNSDSPSRKRRRISGRPPNGPQPQHR 657
            |:...::..:..|| |.|.|    |..|...|    |...|...||   :::..|||:....:||
  Rat    18 GHCRVSTRPSSSPGQLWGSL----GHEGPLAS----PPAQNERLPS---QQLLPRPPHLSVEEHR 71

  Fly   658 CPMAHMQQGSPPLRRPRLRDVATSTQQQQQQYGHQVHHPQQQQQQPPSNYHPMHHHQPQP-HY-- 719
            ...|      |..|.||:.                  ||..||.....:.|...|..|.| .|  
  Rat    72 ASEA------PAGRSPRML------------------HPATQQSPFMVDLHDQVHQGPVPLSYTV 112

  Fly   720 --VPQQQVPPPHVQRSPWDLGSSGGSSGGATSSSSVGPILQQVQAPPQPPSHQQAVGYPQAPPQP 782
              |..|..|.|..|..|                   |...||:.|.....|.|.   ||.....|
  Rat   113 TTVTTQGFPLPASQHIP-------------------GCSAQQLPACSVMFSGQH---YPLCCLPP 155

  Fly   783 ASLMVDLNLNQVPVNLQLRPSEPFWASFCTYPIPAQARLAPCHL----HGVYTQPFPAAPP-PGL 842
            ..|:....:.|:||            .:.|||          ||    |.:...|.||.|| |..
  Rat   156 PQLIQACTMQQLPV------------PYHTYP----------HLISSDHYILHPPPPAPPPQPTH 198

  Fly   843 AAP-----PLQQQHQPLIQAQQMISQATLTAQQQQRDVVAIATANLGPIEAPGA--HGHPHAHPH 900
            .||     .||.|| |.:..|::.::..|...|........:|:..||..:|..  |..||...|
  Rat   199 MAPLGQFVSLQTQH-PRMPLQRLDNEMDLRGDQHPLGSFTYSTSATGPTLSPSVPLHYLPHDPLH 262

  Fly   901 AH-----PHAHQLPPGIHITPLSGAAAAAATHHLHSTAAAAAAVAAGAQITTAQQILFSSDRRTF 960
            ..     |::|.:|                                 .:::|.:..|    ::..
  Rat   263 QELSFGVPYSHMMP---------------------------------RRLSTQRYRL----QQPL 290

  Fly   961 PPHRRIPRFWTANHGHRHVLPPQSLAAHQAPVQIQATSGIINPGFLLNFLAMFPLSPYN-----Q 1020
            ||....|             ||.                 ..|.||..||:|.|:||..     .
  Rat   291 PPPPPPP-------------PPS-----------------YYPSFLPYFLSMLPMSPTTVGPTIS 325

  Fly  1021 HDLSSGDTNETENYEALLSLAERLGEAKPRGLTRNEIDQLPSYKFNPEVHNGDQSSCVVCMCDFE 1085
            .||...|. |.|||||||:||||||:|||||||:.:|:|||||:|||:.|..:|:.||||..|||
  Rat   326 LDLDVDDV-EMENYEALLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFE 389

  Fly  1086 LRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNASD 1123
            :|||||||||:||||||||||||::||||||||.:||:
  Rat   390 VRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 35/44 (80%)
Rnf44XP_006253695.1 RING_Ubox 372..433 CDD:473075 40/56 (71%)

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