DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and Rnf128

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001166820.1 Gene:Rnf128 / 315911 RGDID:1566282 Length:428 Species:Rattus norvegicus


Alignment Length:445 Identity:92/445 - (20%)
Similarity:138/445 - (31%) Gaps:169/445 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   801 RPSEPFWASFCT----YPIPAQARLA-PCHLHGVYTQPFPAAPPPGLAAPPLQQQHQPLIQAQQM 860
            |.:|..|.::..    .|.|...|.. .....|||.|..|..|..|:..||              
  Rat    37 RGAEAVWTAYLNVSWRVPHPGVNRTVWELSEEGVYGQDSPLEPVSGVLVPP-------------- 87

  Fly   861 ISQATLTAQQQQRDVVAIATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIHITPLSGAAAAAA 925
                                      :.|||..      ..:||.:...|.:             
  Rat    88 --------------------------DGPGALN------ACNPHTNFTVPTV------------- 107

  Fly   926 THHLHSTAAAA--AAVAAGAQITTAQQILFSSDRR-------TFPPHRRIPRFWTANHGHRHVLP 981
               ..||...:  |.:..|...|.|.:|..:.:|.       .||             |.|:.:.
  Rat   108 ---WGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFP-------------GTRNEVI 156

  Fly   982 PQS--------------------LAAHQAPVQIQATSGIINPG------------FLLNFLAMFP 1014
            |.|                    |.:.|..:|:   :.:|..|            |.:: ::.|.
  Rat   157 PMSHPGAGDIVAIMIGNLKGTKILQSIQRGIQV---TMVIEVGKKHGPWVNHYSIFFVS-VSFFI 217

  Fly  1015 LSPYNQHDLSSGDTNETENYEALLSLAERLGEAKPRGLTRNEID----------QLPSYKFNPEV 1069
            :            |..|..|....| |.||..|:.:...:.::.          ||.:.|...:.
  Rat   218 I------------TAATVGYFIFYS-ARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKE 269

  Fly  1070 HNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICR-------GNASDYFDG 1127
            ...|..||.||:..::...::|:|.|:|.||..|||.||..:||||:|:       |...|..||
  Rat   270 IGPDGDSCAVCIELYKPNDVVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKALGIEVDVEDG 334

  Fly  1128 -------VDQQQQSQATAGAAAALSGT-SGGSAGVAGTSE------ASAATANPQ 1168
                   |..:..:.|:.......|.| |.|.|.|.|..|      |.:|..|.|
  Rat   335 SVSLQVPVSNEASNTASPHEEDNRSETASSGYASVQGADEPPLEEHAQSANENLQ 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 19/41 (46%)
Rnf128NP_001166820.1 PA_GRAIL_like 48..193 CDD:239037 35/222 (16%)
zf-RING_2 275..318 CDD:290367 19/42 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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