DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and Rlim

DIOPT Version :10

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_035406.3 Gene:Rlim / 19820 MGIID:1342291 Length:600 Species:Mus musculus


Alignment Length:727 Identity:144/727 - (19%)
Similarity:232/727 - (31%) Gaps:248/727 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   498 NGNGNNNGHGHNG--RRYMSDNLNNPSSSMNGLIN-SGHHQRNYNDRNLNNHFGNSEQN------ 553
            |.:.|:.|...:.  ||...|.|:...:....:.| |....|...|.||....|.|.:.      
Mouse     3 NSDSNDKGSDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGESTEEELLRRL 67

  Fly   554 ---------GGPDHRDRAEGSS-----------YNFMRNGGGSGGGGYGRNGSHYQHMAYGN--- 595
                     ..||.....|.|.           .|.:|..|.:...|. |....::.::..|   
Mouse    68 QQIKEGPPPQSPDENRAGESSDDVTNSDSIIDWLNSVRQTGNTTRSGQ-RGNQSWRAVSRTNPNS 131

  Fly   596 -------------NNGASTSTGGPGLMGELPSGSGL------SGSSLSLNNGPGGLNSDSPSRKR 641
                         |||:.||..     ...||...|      |.|...:.|......|..|||..
Mouse   132 GDFRFSLEINVNRNNGSQTSEN-----ESEPSTRRLSVENMESSSQRQMENSASESASARPSRAE 191

  Fly   642 RR----ISGRPPNGPQ-------PQHRCPMAHMQQGSPPL--------RRPRLRDVATSTQQQQQ 687
            |.    ::..|....|       |:||...|..::...||        |.|.|.           
Mouse   192 RNSAEAVTEVPTTRAQRRARSRSPEHRRTRARAERSRSPLQPTSEIPRRAPTLE----------- 245

  Fly   688 QYGHQVHHPQQQQQQPPSNYHPMHHHQPQPHYVPQQQVPPPHVQRSPWDLGSSGGSSGGATSSSS 752
                     |..:.:|..:....|      |...:||:..|.:........|...:....||||.
Mouse   246 ---------QSSENEPEGSSRTRH------HVTLRQQISGPELLGRGLFAASGSRNPSQGTSSSD 295

  Fly   753 VGPILQQVQAPPQPPSHQQAVGYPQAPPQPASLMVDLNLNQVPVNLQLRPSEPFWASFCTY---- 813
            .|             |:.::.|..|.||   ::::||.:.:|      ||.|        |    
Mouse   296 TG-------------SNSESSGSGQRPP---TIVLDLQVRRV------RPGE--------YRQRD 330

  Fly   814 PIPAQAR---LAPCHL------HGVYTQPFPAAPPPGLAA------PPLQQ------QHQPLIQA 857
            .|.::.|   .||.:.      .|.:.:.|..:...|:..      .|:::      .....:..
Mouse   331 SIASRTRSRSQAPNNTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAI 395

  Fly   858 QQMISQAT---------LTAQQQQRDVVAIATANLGPIEAPGAHGHPHAHPHAHPHAHQLPPGIH 913
            |.|:.|..         :.:........::::.|:..:|:....|.                   
Mouse   396 QTMLRQIMTGFGELSYFMYSDSDSEPSASVSSRNVERVESRNGRGS------------------- 441

  Fly   914 ITPLSGAAAAAATHHLHSTAAAAAAVAAGAQITTAQQILF--SSDRRTFPPHRRIPRFWTANHGH 976
                ||...::.     |:::::.:.::..:.:.:...:|  ||:..:..|.||..|        
Mouse   442 ----SGGGNSSG-----SSSSSSPSPSSSGESSESSSEMFEGSSEGGSSGPSRRDGR-------- 489

  Fly   977 RHVLPPQSLAAHQAPVQIQATSGIINPGFLLNFLAMFPLSPYNQHDLSSGDTNETENYEALLSLA 1041
                       |:|||....:..       |.||::......|:.|                   
Mouse   490 -----------HRAPVTFDESGS-------LPFLSLAQFFLLNEDD------------------- 517

  Fly  1042 ERLGEAKPRGLTRNEIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDK 1106
                |.:|||||:.:||.|....|.   .|....:|.||:.::.....||.||||||:|..|:|:
Mouse   518 ----EDQPRGLTKEQIDNLAMRSFG---ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDR 575

  Fly  1107 WLRSNRTCPICR 1118
            ||..|.||||||
Mouse   576 WLSENSTCPICR 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 21/44 (48%)
RlimNP_035406.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..355 70/367 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 417..497 17/126 (13%)
RING-H2_RNF12 544..594 CDD:438336 23/44 (52%)
PDZ-binding. /evidence=ECO:0000255 597..600
Blue background indicates that the domain is not in the aligned region.

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