DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mura and rnf6

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:XP_017209360.1 Gene:rnf6 / 100359398 ZFINID:ZDB-GENE-100209-1 Length:799 Species:Danio rerio


Alignment Length:704 Identity:156/704 - (22%)
Similarity:226/704 - (32%) Gaps:227/704 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   556 PDHR---DRAEGSSYNFMRNGGGSGGGG--------YGRNGSHYQHMAYGNNNGASTSTGGPGLM 609
            |:.|   ..||||| ..:..|..:..|.        :.|.|:..:....||....:.|...|   
Zfish   173 PEPRPQSSEAEGSS-GVVEPGSETSNGDSLLEWLNTFRRTGNATRSGQSGNQTWRAVSRTNP--- 233

  Fly   610 GELPSGSGLSGSSLSLN----NGPGGLNSDSPSRKRRRISGRPPNGPQPQHRCPMAHMQQGSPPL 670
                 .||....||.:|    ....|.:||:|......:...||..|.|            .|| 
Zfish   234 -----NSGEFRFSLEININHEQPEPGEHSDTPDPTDLPMPPPPPPPPPP------------PPP- 280

  Fly   671 RRPRLRDVATSTQQQQQQYGHQVHHPQQQQQQPPSNYHPMHHHQPQPHYVPQQQVPPPHVQRSPW 735
                                     |..|...||:.  |.:..:..|:.:   |.|.|:....| 
Zfish   281 -------------------------PPVQSASPPTT--PYNPSRAAPYSL---QHPTPYSTSRP- 314

  Fly   736 DLGSSGGSSGGATSSSSVGPILQQV--QAPPQPPSHQQAVGYPQAPPQPASLM------------ 786
            .||..|...  .|.||:..|::..:  ||||. |..:.....|.:||..|.|.            
Zfish   315 TLGRRGAVR--RTRSSTTPPVMPPMTSQAPPM-PLRRNLPTLPSSPPPQAPLAFQSQETDGGAVR 376

  Fly   787 -------------VDLNLNQVPVNLQLRP-SEPFWASFCTYPIPAQARLAPCHLHGVYTQPFPAA 837
                         |:.|.::.|....::| |:|..|     |...:.|.:.....|...:   ||
Zfish   377 SQIQVTTSSVNTGVEQNGSEGPDCPNVQPQSDPQVA-----PAAREPRNSRTRSRGRVRR---AA 433

  Fly   838 PPPGLAAPPLQQQHQPLIQAQQMISQATLTAQQQQRDVVAIATANLGPIEAPGA------HGHPH 896
            ...|..:...::...||  .:...|..:.|..         ::::..|:|:.|:      .|.|.
Zfish   434 GAGGALSRSSRRSRSPL--DRNTASSVSPTHS---------SSSSTPPVESAGSTAVSMEMGQPT 487

  Fly   897 AHPHAHPHAHQLPPGIHITPLSGAAAA-----------------AATHHLHSTAAAAAAVAAGAQ 944
            |.|.|.....:.......||:|||...                 .......|.|:...:.|..|:
Zfish   488 AEPTAPTDPPEAGEEEGETPVSGAGGVRRHPTIMLDLQVRRIRPGENRDRDSIASRTRSRARAAE 552

  Fly   945 ITTAQQILFSSDR---------------RTFPPHRRIP--RFWTANHGHRHVLPPQSLAAHQAPV 992
            .|    :.|.||.               ||:....|||  |......|.     |.|:|......
Zfish   553 NT----VTFESDSGGFRRTISRSERAGIRTYVSTIRIPLRRISETGLGE-----PSSMALRSILR 608

  Fly   993 QIQATSGIINPGFLLNFLAMFPLSPYNQHDL---------------------------------- 1023
            ||....|.::.  |:...|....:..:|...                                  
Zfish   609 QIMTGFGELSS--LMETEADSETATPSQDSAPAAGAQTYRAAGAEGGATHGGVESARETLGEGEE 671

  Fly  1024 ---------------SSGDTNE-TENYE-ALLSLA------ERLGEAKPRGLTRNEIDQLPSYKF 1065
                           ||.|||. .||.. .:|.||      |...|..|||||:.:||.|.:..:
Zfish   672 EGQVRVSRTGPEGRPSSRDTNNLVENGTLPILRLAHFFLLNEDEDEEHPRGLTKEQIDNLVTRTY 736

  Fly  1066 NPEVHNGDQS-SCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICR 1118
            ......|:|. :|.||:.::.....||.|||:||||..|:|:||..|.||||||
Zfish   737 GQVNLEGEQGRACSVCINEYAQGNKLRRLPCAHEFHIHCIDRWLSENNTCPICR 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 21/41 (51%)
rnf6XP_017209360.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.880

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