DRSC/TRiP Functional Genomics Resources

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Protein Alignment mura and rnf150

DIOPT Version :9

Sequence 1:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster
Sequence 2:NP_001135553.1 Gene:rnf150 / 100216098 XenbaseID:XB-GENE-5993052 Length:427 Species:Xenopus tropicalis


Alignment Length:80 Identity:28/80 - (35%)
Similarity:46/80 - (57%) Gaps:7/80 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1043 RLGEAKPRGLTRNEIDQLP--SYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVD 1105
            |||:|..:.:::.::..:.  ..:..||..|     |.||:..::...::|:|||.|.||..|||
 Frog   237 RLGDAAKKAISKLQVRTIKKGDKETEPEFDN-----CAVCIEGYKPNDVVRILPCRHLFHKSCVD 296

  Fly  1106 KWLRSNRTCPICRGN 1120
            .||..:||||:|:.|
 Frog   297 PWLLDHRTCPMCKMN 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
muraNP_731367.2 zf-RING_2 1076..1118 CDD:290367 19/41 (46%)
rnf150NP_001135553.1 PA_GRAIL_like 45..183 CDD:239037
UPF0233 <197..>222 CDD:299753
zf-RING_2 266..309 CDD:290367 20/47 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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