DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment by and tns2b

DIOPT Version :10

Sequence 1:NP_649901.1 Gene:by / 41144 FlyBaseID:FBgn0000244 Length:720 Species:Drosophila melanogaster
Sequence 2:XP_021327488.2 Gene:tns2b / 565809 ZFINID:ZDB-GENE-101001-5 Length:1445 Species:Danio rerio


Alignment Length:677 Identity:210/677 - (31%)
Similarity:312/677 - (46%) Gaps:170/677 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 SPLLVRKTLGNAVSPTSSTNTNTIANTYHYTSSSATPTPVRDNFEQLLRERREKVYN-EYRNLDR 196
            ||...|.:.|.| |.:.|.|::.||         .||:|.|.|..:...|..:...| ||..:  
Zfish   845 SPQPFRDSPGYA-SISHSQNSSPIA---------LTPSPKRANHNRASAEENQHGPNEEYTKI-- 897

  Fly   197 ESSGERARVAPAPPQRQYYP-SDGYGIGLKN--DSN--GTLYRKSPSSNGKSTKYNYDFEFNLNL 256
             .|.:::....:||.:...| ..|..:.:|:  |.|  .:|.....|::|...|...        
Zfish   898 -LSDDKSPATFSPPTQNSGPVKAGEMVQIKSPEDVNLPVSLITNISSASGAEDKTTI-------- 953

  Fly   257 DDVRPEPTPYTTRNIHFEDLRLDQDVPDGVVNRRTMERNYHTINSLETTHKRQQLEPLEQLGAVY 321
                   |..|:.::              :::.:...:|..:: .::|.:.|....|        
Zfish   954 -------TDCTSNSL--------------LISSQPSSKNMESV-QVQTLNPRPLSVP-------- 988

  Fly   322 GQNHMEETLTRTRRDLSASTSTSKSTSPLPAIGVPAIAPASPIYATSTKRVSNPNTNGQQQ-MTP 385
                 |....:..|..|..|||:.||||.|        |......:|....|:.|.||::| :||
Zfish   989 -----ESEQDKGERPGSCYTSTTTSTSPQP--------PLCSSERSSASEFSSFNLNGERQSVTP 1040

  Fly   386 ------SPTSRPE---TPAFPV---------TPRTPF---------------------------- 404
                  ...|.|:   ||:||:         .|..|:                            
Zfish  1041 LTDCNEESNSDPDGFITPSFPIASHGYPLLTVPHVPYTGYTEITIPTNLAQPPLPEKQRSSPLHN 1105

  Fly   405 -------------GASSSSSASL-----APTTQLPPESIYQTGPRRGVPPALQPLEVSAD----- 446
                         |..|.|||.:     ..|.::||:|..:.           ||....|     
Zfish  1106 TSDYTPTSLIKSAGKPSVSSAQVHVSFSTTTNEVPPKSTCRI-----------PLSSGVDEPESR 1159

  Fly   447 -SVQFARSSSQFWYKPNLTREDAIALLASAQPGTFLVRDSTTYKDSYGLVVRVSQPP-------- 502
             |.:|.:.||::||||.::|:.|||:|...:.|.||:|||.:::.:|||.::||..|        
Zfish  1160 LSSKFVQDSSKYWYKPGISRDQAIAVLKDKEAGCFLIRDSNSFQGAYGLALKVSTAPAHTNSHTE 1224

  Fly   503 PGS--QELVRHFLIEPTKGGVHLKGCDDEPVFTSLSALVFEHSISQLALPCLLRLPDRDIVPPVR 565
            |||  ::||||||||....||.:|||.:|..|.||||||::|||:.::|||:||:||||:|..::
Zfish  1225 PGSAQEQLVRHFLIESGAKGVKIKGCQNETYFGSLSALVYQHSITPVSLPCVLRIPDRDLVGELQ 1289

  Fly   566 -----ATTPAQQHLLAHGAATNVLWLYSCDTESLTGNEAIRKAIRQMYGQQPLPQPTEVHFKVSS 625
                 ..|.....||..|||.|||:|.|.:||||||.:|:.|..:....|:|.|.||.||||||:
Zfish  1290 DLQSGTNTSTAADLLKQGAACNVLYLNSVETESLTGPQAVSKTTKCTLTQEPRPSPTVVHFKVST 1354

  Fly   626 QGITLTDNTRKKFFRKHYKADVISHCAIDPENRMWTSEGESDKKTIFAFVARRSHSSTDNQCHVF 690
            ||||||||.|:.|||:||....::..::||.::.|.....:..| :|.|||||| .:..|.||:|
Zfish  1355 QGITLTDNQRRLFFRRHYPIHSVTFSSVDPLDQRWVDADNTSCK-MFGFVARRS-GALGNVCHLF 1417

  Fly   691 CDLSVSQPAAAIVSFANRT-LPTEKLR 716
            .:|...|||.|||:|.|:. |..::||
Zfish  1418 AELDPEQPATAIVNFINKVMLGPQQLR 1444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
byNP_649901.1 SH2_Tensin_like 454..559 CDD:198181 57/114 (50%)
PTB_tensin 578..711 CDD:269924 65/133 (49%)
tns2bXP_021327488.2 None

Return to query results.
Submit another query.