DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment by and Tns3

DIOPT Version :9

Sequence 1:NP_001163569.1 Gene:by / 41144 FlyBaseID:FBgn0000244 Length:720 Species:Drosophila melanogaster
Sequence 2:XP_008768557.1 Gene:Tns3 / 360980 RGDID:1564174 Length:1562 Species:Rattus norvegicus


Alignment Length:657 Identity:211/657 - (32%)
Similarity:306/657 - (46%) Gaps:131/657 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 FGPTNTNVNSNSSSNNGGTGDMIKPPTRLTSPLLVRKTLGNAVSPTSSTNTNTIANTYHYTSSSA 167
            |.|....::..:|.:.|      :.|...|.  ::..|:|.:.||..|..|...|:      ..|
  Rat   981 FSPPEPQLSIPASLHKG------REPRGCTE--IISHTVGMSESPLGSKPTLLRAD------MPA 1031

  Fly   168 TPTPVRDNFEQLLRERREKVYNEYRNLDRESSGERARVAPAPPQRQYYPSDGYG----IGLKNDS 228
            ||     ||:|        |:.....:.....|:| |.:|...:||:..|....    :|....|
  Rat  1032 TP-----NFQQ--------VFAASCTVSSNGPGQR-RESPPSAERQWAESSPKSTLTLLGNNRPS 1082

  Fly   229 NGTLYRKSPSSNGKSTKYNYDFEFNLNLDDVRPEPTPYTTRNIHFEDLRL--DQDV--PDGVVNR 289
            ...|......|:||::.....|:            :.....:.|..:|.:  .||.  |.|    
  Rat  1083 ESPLGTHEFCSSGKNSPGLPCFQ------------SSELQASFHSHELSMSESQDAMPPAG---- 1131

  Fly   290 RTMERNYHTINSLETTHKRQQLEPLEQLGAVYGQNHMEETLTRTRRDLSASTSTSKSTSPLPAIG 354
               .:.:...|::.|.  ...|.|.|..|.:...:|                    ..||:|...
  Rat  1132 ---SQTFLGFNTVTTV--TSGLPPSEDAGTLLVNSH--------------------GPSPVPGTP 1171

  Fly   355 VPAIAPA-----SPIYATSTKRVSNPNTNGQQQMTPSPTSRPETPAFPVTPRTPFGASSSSSASL 414
            :.....|     |..:.|.:...|:.::.|.|.   ...|.|..|..|...||..|..|..|.| 
  Rat  1172 LTTTGAADNGFLSHNFLTVSPGASSHHSPGLQN---QGISLPGQPPLPEKKRTSEGDRSLGSVS- 1232

  Fly   415 APTTQLPPESIYQTGPRRG----------VPPALQPLEVSA---DS-------VQFARSSSQFWY 459
                   |.|...:.|..|          :|...:|.||:.   ||       |:|.:.:|:|||
  Rat  1233 -------PSSSGFSSPHSGSTMSIPFPNVLPDFCKPSEVATPLPDSPNDKLVIVKFVQDTSKFWY 1290

  Fly   460 KPNLTREDAIALLASAQPGTFLVRDSTTYKDSYGLVVRVSQPPPG-----------SQELVRHFL 513
            |.:::||.|||:|....||:|:||||.:::.:|||.::|:.|||.           |.|||||||
  Rat  1291 KADISREQAIAMLKDKAPGSFIVRDSHSFRGAYGLAMKVATPPPSVLHLNKKAGDLSNELVRHFL 1355

  Fly   514 IEPTKGGVHLKGCDDEPVFTSLSALVFEHSISQLALPCLLRLPDRDIVPPVRATTP-----AQQH 573
            ||.|..||.||||.:||.|.||:|||.:|||:.|||||.|.:|:||.:..:...:|     :...
  Rat  1356 IECTPKGVRLKGCSNEPYFGSLTALVCQHSITPLALPCKLLIPERDPLEEIAENSPQTAANSAAE 1420

  Fly   574 LLAHGAATNVLWLYSCDTESLTGNEAIRKAIRQMYGQQPLPQPTEVHFKVSSQGITLTDNTRKKF 638
            ||..|||.||.:|.|.:.|||||::|::||:.....|:|.|..|.||||||:||||||||.||.|
  Rat  1421 LLKQGAACNVWYLNSVEMESLTGHQAVQKALNMTLVQEPPPVSTVVHFKVSAQGITLTDNQRKLF 1485

  Fly   639 FRKHYKADVISHCAIDPENRMWTSEGESDKKTIFAFVARRSHSSTDNQCHVFCDLSVSQPAAAIV 703
            ||:||....:..||:||::|.|..:|.|.|  :|.||||:..|:|||.||:|.:....|||:|||
  Rat  1486 FRRHYPVSSVIFCALDPQDRKWIKDGPSSK--VFGFVARKQGSATDNVCHLFAEHDPEQPASAIV 1548

  Fly   704 SFANRTL 710
            :|.::.:
  Rat  1549 NFVSKVM 1555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
byNP_001163569.1 SH2_Tensin_like 454..559 CDD:198181 60/115 (52%)
PTB_tensin 578..711 CDD:269924 68/133 (51%)
Tns3XP_008768557.1 C1 39..85 CDD:237996
PTPc_DSPc 190..304 CDD:214469
PTEN_C2 291..417 CDD:287393
SH2_Tensin_like 1285..1401 CDD:198181 60/115 (52%)
PTB_tensin 1425..1556 CDD:269924 68/133 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 138 1.000 Domainoid score I4715
eggNOG 1 0.900 - - E2759_KOG1930
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46409
orthoMCL 1 0.900 - - OOG6_103416
Panther 1 1.100 - - O PTHR45734
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1051
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.770

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