DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment by and Tns4

DIOPT Version :10

Sequence 1:NP_649901.1 Gene:by / 41144 FlyBaseID:FBgn0000244 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_001020052.1 Gene:Tns4 / 303517 RGDID:1310402 Length:718 Species:Rattus norvegicus


Alignment Length:701 Identity:196/701 - (27%)
Similarity:288/701 - (41%) Gaps:178/701 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 NSLPFSYGIAKTSTPLRKTPTPTRVDS---------------FLDFDFGPTNTNVNSNSS---SN 117
            ::|...| |..|||..|...:|.|..|               ||..|. |..|..:||.|   |.
  Rat   140 DALDIKY-IEVTSTRSRCLDSPQRCSSPCVTPPFGSPRSGGLFLSRDI-PRETRSSSNESLIFSG 202

  Fly   118 NGGTGDMIKPPTRLTSPLLVRKTLGNAVSPTSSTNTNTIANTYHYTSSSATPTPVRDNFEQLLRE 182
            |.|.|         :||                          |..||.:...|.|::       
  Rat   203 NQGRG---------SSP--------------------------HTPSSLSNSIPCRES------- 225

  Fly   183 RREKVYNEYRNLDRESSGERARVAP--APPQRQYYPSDGYGIGLKNDSNGTLYRKSPSSNGKSTK 245
                               ||..:|  .||        |:..||:....|:  |.|..|....:.
  Rat   226 -------------------RASGSPLATPP--------GWEKGLRAPQWGS--RVSTLSASPVSD 261

  Fly   246 YNYDFEFNLNLDDVRPEPTPYTTRNIHFEDLRLDQDVPDGVVNRRTMERNYHTINSLETTHKRQQ 310
            .:|.|..|.:|........|.::|:                                        
  Rat   262 ISYVFGSNQSLPHSSLSSYPPSSRS---------------------------------------- 286

  Fly   311 LEPLEQLGAVYGQNHMEETLTRTRRDLSASTSTSKSTSPLPAIGVPAIAPASPIYATSTKRVSNP 375
                  ||:....:....:|.|..:.:.:|.:...| :|:..:|.|...|::|:...........
  Rat   287 ------LGSPASSSSSLHSLDRGSQCVRSSDAQVPS-NPIVGMGQPQAVPSTPVAKEQASSCPPS 344

  Fly   376 NTNGQQQM-------TPSPTSRP--ETPAF-------PVTPRTPFGASSSSSASLAPTTQLPPES 424
            .||....:       .|.|.|.|  :||.:       ..:|.....|:.|.|.:|.......|..
  Rat   345 VTNSMADIPIVLINGNPEPQSPPAQQTPRYQDSVQSRATSPSHLCQATKSHSKTLPDVPLTSPSH 409

  Fly   425 IYQTGPRRG-----VPPALQPLEVSAD---SVQFARSSSQFWYKPNLTREDAIALLASAQPGTFL 481
            :.|......     ||....|...:.|   :::|...:|::|.||::|||.||.||.:.:||||:
  Rat   410 LCQATKSHSKTLPDVPLTASPESPAKDMQPTMKFVMDTSKYWLKPSITREQAINLLRTEKPGTFV 474

  Fly   482 VRDSTTYKDSYGLVVRVSQPP------PG--SQELVRHFLIEPTKGGVHLKGCDDEPVFTSLSAL 538
            :|||::|:.|:||.::|.:.|      ||  |.:.:||||:|.:..||||||.|:||.|.||||.
  Rat   475 IRDSSSYRGSFGLALKVQETPASAPNRPGEDSTDFIRHFLVESSAKGVHLKGADEEPYFGSLSAF 539

  Fly   539 VFEHSISQLALPCLLRLPDRDI---VPPVRATTPAQQHLLAHGAATNVLWLYSCDTESLTGNEAI 600
            |.:|||..|||||.|.:|.:::   .|...:.|..|...|...|..:.|:|.|...|:|:|..|:
  Rat   540 VCQHSIMALALPCKLTIPQKELGGAEPASDSPTHGQTSCLKISAGCHTLYLTSVSVETLSGALAV 604

  Fly   601 RKAIRQMYGQQPLPQPTEVHFKVSSQGITLTDNTRKKFFRKHYKADVISHCAIDPENRMWTSEGE 665
            :|||..|..:..||.||.|||||:.|||||||..||.|||:||....:..|.:|||.|.|....:
  Rat   605 QKAISVMLERDVLPTPTVVHFKVTEQGITLTDVQRKVFFRRHYPLIALRFCGMDPEQRKWQKYCK 669

  Fly   666 SDKKTIFAFVARRSHSSTDNQCHVFCDLSVSQPAAAIVSFANRTL-PTEKL 715
            ..:  ||.|||:......:|.||:|.:...:|||:.::|.....| .||::
  Rat   670 PSR--IFGFVAKSQTEPQENACHLFAEYDAAQPASQVISLVTALLKDTERV 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
byNP_649901.1 SH2_Tensin_like 454..559 CDD:198181 57/112 (51%)
PTB_tensin 578..711 CDD:269924 55/133 (41%)
Tns4NP_001020052.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..244 23/124 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..437 32/211 (15%)
SH2 447..560 CDD:472789 57/112 (51%)
PTB_tensin 583..712 CDD:269924 54/130 (42%)

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