DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment by and Tns4

DIOPT Version :9

Sequence 1:NP_001163569.1 Gene:by / 41144 FlyBaseID:FBgn0000244 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_766152.2 Gene:Tns4 / 217169 MGIID:2144377 Length:696 Species:Mus musculus


Alignment Length:672 Identity:193/672 - (28%)
Similarity:286/672 - (42%) Gaps:168/672 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GIAKTSTPLRKTP--TPTRVDSFLDFDFGPTNTNVNSNSS---SNNGGTGDMIKPPTRLTSPLLV 137
            |..:.|:|....|  :|.....||..|. |..|..:||.|   |.|.|.|         .|||  
Mouse   159 GPQRCSSPCATPPFGSPRSGSLFLSRDI-PRETRSSSNESLIFSGNQGRG---------PSPL-- 211

  Fly   138 RKTLGNAVSPTSSTNTNTIANTYHYTSSSATPTPVRDNFEQLLRERREKVYNEYRNLDRESSGER 202
                      |.|:.:|.|......||.|...||  ..:|:.||..:.              |.|
Mouse   212 ----------TPSSLSNAIPCRESRTSGSPLATP--PGWEKGLRAPQR--------------GSR 250

  Fly   203 ARVAPAPPQRQYYPSD-GYGIGLKNDSNGTLYRKSPSSNGKSTKYNYDFEFNLNLDDVRPEPTPY 266
            ..:..|.|     .|| .|..|    ||.:|...|.||...|:               |...:|.
Mouse   251 VSILSASP-----VSDVSYVFG----SNQSLPHSSLSSYPSSS---------------RSLGSPA 291

  Fly   267 TTRNIHFEDLRLDQDVPDGVVNRRTMERNYHTINSLETTHKRQQLEPLEQLGAVYGQNHMEETLT 331
            ::.:                           :::||:.             |:..|:        
Mouse   292 SSSS---------------------------SLHSLDR-------------GSQCGR-------- 308

  Fly   332 RTRRDLSASTSTSKSTSPLPAIGVPAIAPASPIYATSTKRVSNPNTNGQQQMTPSP----TSRPE 392
                    .:.....::|:..:|.|....::|:   :.::.|:...:....|...|    ...||
Mouse   309 --------PSDAQAPSNPILGMGQPQAVQSTPV---AKEQASSCPASVTNSMADIPIVLINGSPE 362

  Fly   393 TPAFPVTPRTPFGASSSSS----------ASLAPTTQLP--PESIYQTGPRRGVPPALQPLEVSA 445
             |..|...|||....|..|          |..:|:..||  |......||.:.:.|         
Mouse   363 -PQSPPAQRTPGHQDSVQSRVTSPSHLCQAIKSPSKTLPDVPLPASPDGPAKDMQP--------- 417

  Fly   446 DSVQFARSSSQFWYKPNLTREDAIALLASAQPGTFLVRDSTTYKDSYGLVVRV--------SQPP 502
             :::|...:|::|:||::|||.||.||.:.:||.|::|||::|:.|:||.::|        ::|.
Mouse   418 -TMKFVMDTSKYWFKPSITREQAINLLRTEKPGAFVIRDSSSYRGSFGLALKVQETSASAPNRPG 481

  Fly   503 PGSQELVRHFLIEPTKGGVHLKGCDDEPVFTSLSALVFEHSISQLALPCLLRLPDRDI---VPPV 564
            ..|.:|:||||||.:..||||||.|:||.|.|||:.|.:|||..|||||.|.:|.:::   .|..
Mouse   482 EDSSDLIRHFLIESSAKGVHLKGADEEPYFGSLSSFVCQHSIMALALPCKLTIPQKELGGAEPAS 546

  Fly   565 RATTPAQQHLLAHGAATNVLWLYSCDTESLTGNEAIRKAIRQMYGQQPLPQPTEVHFKVSSQGIT 629
            .:.|..|...|...|..:.|:|.|...|:|:|..|::|||.....:..||.||.|||||:.||||
Mouse   547 DSPTHGQTSCLKISAGCHTLYLSSVSVETLSGALAVQKAISVTLERDVLPTPTVVHFKVTEQGIT 611

  Fly   630 LTDNTRKKFFRKHYKADVISHCAIDPENRMWTSEGESDKKTIFAFVARRSHSSTDNQCHVFCDLS 694
            |||..||.|||:||....:..|.:|||.|.|....:..:  ||.|||:......:|.||:|.:..
Mouse   612 LTDVQRKVFFRRHYPLSALRFCGMDPEQRKWQKYCKPSR--IFGFVAKSQTEPQENVCHLFAEYD 674

  Fly   695 VSQPAAAIVSFANRTL-PTEKL 715
            ..|||:.::|.....| .||::
Mouse   675 AVQPASQVISLVTALLQDTERM 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
byNP_001163569.1 SH2_Tensin_like 454..559 CDD:198181 55/112 (49%)
PTB_tensin 578..711 CDD:269924 54/133 (41%)
Tns4NP_766152.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..246 32/110 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..344 16/146 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..416 16/60 (27%)
SH2 425..538 CDD:301589 55/112 (49%)
PTB_tensin 561..691 CDD:269924 53/131 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 138 1.000 Domainoid score I4813
eggNOG 1 0.900 - - E2759_KOG1930
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 228 1.000 Inparanoid score I3453
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0012562
OrthoInspector 1 1.000 - - otm44309
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45734
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

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