DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment by and Tns2

DIOPT Version :9

Sequence 1:NP_001163569.1 Gene:by / 41144 FlyBaseID:FBgn0000244 Length:720 Species:Drosophila melanogaster
Sequence 2:XP_030104299.1 Gene:Tns2 / 209039 MGIID:2387586 Length:1408 Species:Mus musculus


Alignment Length:631 Identity:213/631 - (33%)
Similarity:294/631 - (46%) Gaps:119/631 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 PLLVRKTLGNAVS--------PTSS--TNTNTIANTYHYTSSSATPTPV-RD---NFEQLLRERR 184
            |.|..:.||..:|        |.|.  .:|..:|:|..:...|.:|.|. ||   ....|.|..|
Mouse   838 PYLQPRKLGYEISAEDGRDKYPLSGHLASTGPLASTELFPPVSESPEPSWRDGSSGHSTLPRSPR 902

  Fly   185 EKVYNEYRNLDRESSGERARVAPAPPQRQYYPSDGYGIGLKNDSNGTLYRKSPSSNGKSTKYNYD 249
                      |.:.|.......|:.|                     |:..|| ..||       
Mouse   903 ----------DPQCSASSELSGPSTP---------------------LHTSSP-VQGK------- 928

  Fly   250 FEFNLNLDDVRPEPTPYTTRNIHFEDLRLDQDVPDGV--VNRRTMERNYHTINSLETTHKRQQLE 312
             |.|...|..|......|.|      |...:.:|..|  |..:|.|        |.|:.:.:||:
Mouse   929 -ESNRRQDTTRSPSLAPTQR------LSPGEALPSVVQGVAEKTPE--------LLTSSRPEQLD 978

  Fly   313 --PLEQLGAVYGQNHMEETLTRTRRDLSASTSTSKSTSPLPAIGVPAI--APASPIYATSTKRVS 373
              |..|..|....|...:     .|.....|:::...||:|.. :|.:  ||......||.....
Mouse   979 PSPFSQTSAPGSPNGWPQ-----ERSPGGHTNSASPRSPVPTT-LPGLRHAPWQGPRGTSDSPDG 1037

  Fly   374 NPNTNGQQQM-----TPSPTSRPETPAFPVTPRTPFGASSSSSASLAPTTQLPPESIYQTGPRRG 433
            :|.|....||     :|.|.....|||||:.  |.:.|:......|.....||......:.|.|.
Mouse  1038 SPLTPVPTQMPWLVGSPEPPQSSPTPAFPLA--TSYDANGPIQPPLPEKRHLPGSGQQPSPPARS 1100

  Fly   434 V---------------PPALQPLEVSADSVQFARSSSQFWYKPNLTREDAIALLASAQPGTFLVR 483
            .               ||. .||:.:..:|:|.:.:|:|||||:|:|:.|||||....||.||:|
Mouse  1101 TNQHVTFASPLPDVTQPPE-HPLQENQSNVKFVQDTSKFWYKPHLSRDQAIALLKDKDPGAFLIR 1164

  Fly   484 DSTTYKDSYGLVVRVSQPPPG--------SQELVRHFLIEPTKGGVHLKGCDDEPVFTSLSALVF 540
            ||.:::.:|||.::|:.|||.        |::||||||||....||.:|||..||.|.||||||.
Mouse  1165 DSHSFQGAYGLALKVATPPPSAQPWKGDPSEQLVRHFLIETGPKGVKIKGCPTEPYFGSLSALVS 1229

  Fly   541 EHSISQLALPCLLRLPDRDIV-----PPVRATTPAQQHLLAHGAATNVLWLYSCDTESLTGNEAI 600
            :||||.::|||.||:|.:|.:     .||.........||..|||.:||:|.|.:||||||.:|:
Mouse  1230 QHSISPISLPCCLRIPSKDPLEETPEAPVPTNMSTAADLLRQGAACSVLYLTSVETESLTGPQAV 1294

  Fly   601 RKAIRQMYGQQPLPQPTEVHFKVSSQGITLTDNTRKKFFRKHYKADVISHCAIDPENRMWTS-EG 664
            .||........|:|.|..||||||:||||||||.||.|||:||..:.|:..:.||::|.||: :|
Mouse  1295 AKASSAALSCSPVPVPAIVHFKVSAQGITLTDNQRKLFFRRHYPVNSITFSSTDPQDRRWTNPDG 1359

  Fly   665 ESDKKTIFAFVARRSHSSTDNQCHVFCDLSVSQPAAAIVSFANRTL 710
            .:.|  ||.|||::..|..:|.||:|.:|...|||:|||:|..:.|
Mouse  1360 ATSK--IFGFVAKKPGSPWENVCHLFAELDPDQPASAIVTFITKVL 1403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
byNP_001163569.1 SH2_Tensin_like 454..559 CDD:198181 60/112 (54%)
PTB_tensin 578..711 CDD:269924 67/134 (50%)
Tns2XP_030104299.1 C1 33..80 CDD:237996
PTP_DSP_cys 133..291 CDD:391942
PTEN_C2 298..425 CDD:371036
PHA03247 <726..1124 CDD:223021 79/348 (23%)
SH2_Tensin_like 1135..1248 CDD:198181 60/112 (54%)
PTB_tensin 1272..1404 CDD:269924 67/134 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 138 1.000 Domainoid score I4813
eggNOG 1 0.900 - - E2759_KOG1930
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44309
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR45734
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5448
SonicParanoid 1 1.000 - - X1051
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.900

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