DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm3 and AT1G11950

DIOPT Version :10

Sequence 1:NP_788611.1 Gene:Kdm3 / 41143 FlyBaseID:FBgn0037703 Length:854 Species:Drosophila melanogaster
Sequence 2:NP_172659.3 Gene:AT1G11950 / 837747 AraportID:AT1G11950 Length:875 Species:Arabidopsis thaliana


Alignment Length:900 Identity:232/900 - (25%)
Similarity:366/900 - (40%) Gaps:235/900 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 TSRKRTISSTSF------------SISTRTDPK---SIIEIHIFNDSLPIKRACCEVENPTLKAE 63
            |||.|:..|.|.            ::|:|::.:   |.::...|||        |.....:||| 
plant   130 TSRSRSKKSVSVDTWLVNNEIDVSALSSRSESELSDSYLKTEYFND--------CRSMTRSLKA- 185

  Fly    64 QRVQQEEESLGQVPPLTE--EEQQRHDEFRNSGSIFLQDLPCFKLQQAQPIAGSSPIPKCRECRR 126
                    :||::....:  :.::|:........:.|...||.| :....::....:.||..||.
plant   186 --------NLGELAICHQCSKGERRYLFICTFCEVRLYCFPCIK-KWYPHLSTDDILEKCPFCRG 241

  Fly   127 R-NLATTEGEPSSVS------DVYCRFYEFR-----RLQFNENGELCVVGFPNPYSEPSPEDIAI 179
            . |..|.......:.      |.|.|||..|     .|.|.:  :||           ..:|..|
plant   242 TCNCCTCLHSSGLIETSKRKLDKYERFYHLRFLIVAMLPFLK--KLC-----------KAQDQEI 293

  Fly   180 WQPDKNTPPTSGYMDIQVCRYILLHAGDQFCYIWHQEAEALSLHQNTDGTIAWKKAVKGTREICD 244
            ....|.....:..:||                     :|:|..::.              |..|:
plant   294 ETEAKVQDSMASQVDI---------------------SESLCSNEE--------------RVFCN 323

  Fly   245 VCDTTLFNYHWTCRKCGFGVCLDCVKDRKEGLRLRRAENAAQKGCDEYHWLLCSDPSGPQEHVLT 309
            .|.|::.:.|.:|.||.:.:||:|.::.:.|                  ||  ||  .|:..:..
plant   324 HCATSIVDLHRSCPKCSYELCLNCCQEIRGG------------------WL--SD--RPECQLQF 366

  Fly   310 ELMLTQIIAGDALNVLGRLLHEVRTLWQVPQVCGCLLSKQAIEDAQSKEVIQDMIKESQLKQHTS 374
            |...|:.|.|:|                              .:..|..|.:|..|...:|.:..
plant   367 EYRGTRYIHGEA------------------------------AEPSSSSVSEDETKTPSIKWNAD 401

  Fly   375 YS-SLASEQKVHQQQRLDQLHATKLEFARELGVDYVPGRVWTKETLGKDPITTAFDNLK-HINFL 437
            .: |:....|     .|.....:.||..|.|.|      .|..:...|.....|..::| .:::.
plant   402 ENGSIRCAPK-----ELGGCGDSVLELKRILPV------TWMSDLEQKAETFLASYSIKPPMSYC 455

  Fly   438 R--KGLAGLRRFLPPR---TMTFAYSTQLAPGVPHEFLCDGRLLRLTDAMHPDNRVLFQEVWKCG 497
            |  ..::.::|....|   :..:.||       |...          |.:..:..:.|||.|..|
plant   456 RCSSDMSSMKRKAASRDGSSDNYLYS-------PDSL----------DVLKQEELLHFQEHWSKG 503

  Fly   498 QPVMISEVARSLNLDLWHP----QAFCRD----FGDKPNDL--INCLNGNLVPNQPMRHFWEGFQ 552
            :||::.....:.....|.|    :|.|.:    .....:|:  |:|| .|.........|:||: 
plant   504 EPVIVRNALNNTAGLSWEPMVMWRALCENVDSAISSNMSDVKAIDCL-ANCEVKINTLCFFEGY- 566

  Fly   553 CMTKRLPDAYGK------PMLLKLKDWPPGDDFAEILPTRFADLMKGLPMPEYT-LRTGNLNIAS 610
                    :.|:      |.:||||||||.|.|..:||....:.:..||..||: .|:|.||||:
plant   567 --------SKGRTYENFWPEMLKLKDWPPSDKFENLLPRHCDEFISALPFQEYSDPRSGILNIAT 623

  Fly   611 CLPKMFVPPDLGPKMYNAYGSALHPDKG--TTNLHLDISDAVNIMVYVG-IPQDGDTRPQMA--- 669
            .||:..:.||||||.|.|||::....:|  .|.||.|:||||||:::.. :....:.|..:|   
plant   624 KLPEGLLKPDLGPKTYVAYGTSDELGRGDSVTKLHCDMSDAVNILMHTAEVTLSEEQRSAIADLK 688

  Fly   670 ---ATQKAIEIGGCDYITRARCQSPDVL-----PGALWHIFPARDADKIRDLLNRVTLEKGF--- 723
               ..|...|:...:.:......|.:::     .||||.||...|..|:.:.|.:..:|  |   
plant   689 QKHKQQNEKELQEQNGLEEEEVVSDEIVVYDETSGALWDIFKREDVPKLEEYLRKHCIE--FRHT 751

  Fly   724 ---RLEPDHDPIHDQNWYLDDKLRARLFKEYGVEGHPIVQCLGDAVFIPAGAPHQVQNLHNCIKV 785
               |:...:.|||||:::|..:.:.:|..|:|:|....||.||:|||||||.||||:||.:|.||
plant   752 YCSRVTKVYHPIHDQSYFLTVEHKRKLKAEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKV 816

  Fly   786 AEDFVSPENITHCYHLTHEFRRLSHSHTNHEDKLQIKNIIYHAI----KDCCTIL 836
            |.||||||||..|..||.|||:|..:|...||||:||.::.:|:    |:..|:|
plant   817 AVDFVSPENIDECLRLTDEFRQLPKNHKAREDKLEIKKMVIYAVEQALKEVETLL 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm3NP_788611.1 JmjC 605..657 CDD:214721 27/53 (51%)
cupin_RmlC-like 694..789 CDD:477354 43/105 (41%)
AT1G11950NP_172659.3 PTZ00121 <29..>122 CDD:173412
JmjC 599..672 CDD:214721 33/72 (46%)
cupin_RmlC-like 721..820 CDD:477354 43/100 (43%)
Blue background indicates that the domain is not in the aligned region.

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