DRSC/TRiP Functional Genomics Resources

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Protein Alignment JHDM2 and B160

DIOPT Version :9

Sequence 1:NP_001287255.1 Gene:JHDM2 / 41143 FlyBaseID:FBgn0037703 Length:854 Species:Drosophila melanogaster
Sequence 2:NP_193874.2 Gene:B160 / 827895 AraportID:AT4G21430 Length:927 Species:Arabidopsis thaliana


Alignment Length:740 Identity:158/740 - (21%)
Similarity:271/740 - (36%) Gaps:223/740 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 HWTCRKCGFG------------VCLDCVKDRKEGLRLRRAENAAQKGC----DEYHWLLCS-DPS 301
            || |...|||            .|:||::.|.:|     ::...:|.|    ......:|| ..|
plant   228 HW-CGTRGFGDLISCLSCEREFFCIDCIEKRNKG-----SKEEVEKKCPVCRGSCRCKVCSVTNS 286

  Fly   302 GPQEHVLTELMLTQIIAGDALNVLGRLLHEVRTLWQVPQVCGCLLSKQAIE---DAQSKE--VIQ 361
            |     :||...:|.:..|    :.|:||....:..:..|...:.::..:|   ||:.||  ..:
plant   287 G-----VTECKDSQSVRSD----IDRVLHLHYAVCMLLPVLKEINAEHKVEVENDAEKKEGNPAE 342

  Fly   362 DMIKESQL-----------------------KQHTSYSSLASEQKVHQQQRLDQLHATKLE---- 399
            ..|..|:|                       .:.:|...|.|:|...|:....::.:.|..    
plant   343 PQIHSSELTSDDRQPCSNGRDFAVVDLQRMCTRSSSVLRLNSDQDQSQESLSRKVGSVKCSNGIK 407

  Fly   400 ------------FARELGVDYVPGRVWTKETLGKDPITTAFD----------------------- 429
                        .:..|.:...|..:.:|..:..:.:.:.::                       
plant   408 SPKVCKRKEVKGCSNNLFLSLFPLELTSKLEISAEEVVSCYELPEILDKYSGCPFCIGMETQSSS 472

  Fly   430 ---NLKHINFLRKGLAGLRRFLPPRTMTFAYSTQLAPGVPHEFLCDGRLLRLTDAMHPDNRVLFQ 491
               :||..:..|:.  |...||       .|.|.|      :|             |.:|...||
plant   473 SDSHLKEASKTRED--GTGNFL-------YYPTVL------DF-------------HQNNLEHFQ 509

  Fly   492 EVWKCGQPVMISEVARSLNLDLWHPQA-FCR---DFGDKPNDLINCLNGNLVPNQPMRHFWEGFQ 552
            ..|..|.||::..|.:|.:...|.|.| ||.   :..:|..:..:|::            |...:
plant   510 THWSKGHPVIVRSVIKSGSSLNWDPVALFCHYLMNRNNKTGNTTDCMD------------WFEVE 562

  Fly   553 CMTKR--LPDAYGKPML------LKLKDWPPGDDFAEILPTRFADLMKGLPMPEY-TLRTGNLNI 608
            ...|:  |....||...      |||:.|.....|.|..|..:|:::..||:..| ..:.|.|||
plant   563 IGVKQFFLGSLRGKAETNTCQERLKLEGWLSSSLFKEQFPNHYAEILNILPISHYMDPKRGLLNI 627

  Fly   609 ASCLPKMFVPPDLGPKMYNAYGSA---LHPDKGTTNLHLDISDAVNIMVYV-------------- 656
            |:.||....|||.||.:..:|.|.   ..|| ....|..:..|.|:|::||              
plant   628 AANLPDTVQPPDFGPCLNISYRSGEEYAQPD-SVKKLGFETCDMVDILLYVTETPVSTNQICRIR 691

  Fly   657 ------------------------GIPQD-------GDTRPQ---MAATQKAIEIGG-----CDY 682
                                    |..:|       .|:...   :.|..:..|..|     |:|
plant   692 KLMKNIGRVRSKNPAKGRESRFDKGKKRDRLDDYSSSDSESSQHCLGAKCRGSEFEGEERESCNY 756

  Fly   683 ITRARCQSPDV--LPGALWHIFPARDADKIRDLLNRVTLE----KGFRLEPDHDPIHDQNWYLDD 741
                .|:...:  ..||.|.:|..:|..|:.:.:...:||    ...:.:..| |:.:|::|||:
plant   757 ----SCEEESLSNTYGAQWDVFQKQDVSKLLEYIKNHSLELESMDSSKKKVSH-PLLEQSYYLDE 816

  Fly   742 KLRARLFKEYGVEGHPIVQCLGDAVFIPAGAPHQVQNLHNCIKVAEDFVSPENITHCYHLTHEFR 806
            ..:|||.:|:.||.....||:|:||.:|||.|:|::...:|:.....|:|||:::.......|..
plant   817 YHKARLKEEFDVEPWSFDQCVGEAVILPAGCPYQIRKNKSCVNAVLKFLSPEHVSESIKRVKELN 881

  Fly   807 RLSHSHTNHEDKLQIKNIIYHAIKD 831
            :|..|..:..:|:::|.:..|.|.:
plant   882 QLPQSVKSKANKIEVKKMAIHKISE 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JHDM2NP_001287255.1 JmjC 605..657 CDD:214721 21/92 (23%)
cupin_like 694..789 CDD:304367 31/98 (32%)
B160NP_193874.2 WRC 8..49 CDD:370168
FYVE_like_SF <224..273 CDD:333710 13/50 (26%)
cupin_like 765..859 CDD:389752 31/94 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 81 1.000 Domainoid score I2943
eggNOG 1 0.900 - - E1_KOG1356
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 258 1.000 Inparanoid score I987
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1185631at2759
OrthoFinder 1 1.000 - - FOG0001431
OrthoInspector 1 1.000 - - otm2947
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12549
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X572
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.970

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