Sequence 1: | NP_001287255.1 | Gene: | JHDM2 / 41143 | FlyBaseID: | FBgn0037703 | Length: | 854 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_077340.3 | Gene: | Hr / 60563 | RGDID: | 620634 | Length: | 1181 | Species: | Rattus norvegicus |
Alignment Length: | 845 | Identity: | 221/845 - (26%) |
---|---|---|---|
Similarity: | 329/845 - (38%) | Gaps: | 179/845 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 RACCEVENPTLKAEQRVQQEEESLGQVPPLTEEEQQRHDEFRNSGSIFLQDLPCFKLQQAQPIAG 114
Fly 115 SSPIPKCRECRRR-NLATTEGEPSSVSDVYCRFYEFRRLQFNENGELCVVGFPNPYSEPSPEDIA 178
Fly 179 IWQPDKNTPPTSGYMDIQVCRYILLHAGDQFCYIWHQEAEALSLHQNTDGTIAWKKAVKGTREIC 243
Fly 244 DVCDTTLFNYHWTCRKCGFGVCLDC------VKDR-KEGLRLRRAENAAQKGCDEYHWLLCSDPS 301
Fly 302 GPQEHVLTELMLTQIIAGDALNVLGRLLHEVRTLWQVPQVCGCLLSKQAI---EDAQSKEVIQ-- 361
Fly 362 ----------DMIKESQLKQHT--SYSSLASEQKVHQQQRLDQL------HATKLEFARE-LGVD 407
Fly 408 YVPGRVWTKETLGKDPITTAFDN------------------LKHINFLRKGLAGLRRFLPPRTMT 454
Fly 455 FAYSTQLAPGVPHEFLCDGRLLRLTDAMHPDNRVLFQEVWKCGQPVMISEVARSLNLDLWHPQAF 519
Fly 520 CRDFGDKPNDLINCLNGN------LVPNQP----MRHFWEGFQCMTKRLPDAYGKPMLLKLKDWP 574
Fly 575 PGDDFAEILPTRFADLMKGLPMPEYTLRTGNLNIASCLPKMFVPPDLGPKMYNAYGSALHPDK-G 638
Fly 639 TTNLHLDISDAVNIMVYVGIPQDGDTRPQMAATQKAIEIGGCDYITRARCQSPDVLPGALWHIFP 703
Fly 704 ARDADKIRDLLNRVTLEKGFRLEPDHDPIHDQNWYLDDKLRARLFKEYGVEGHPIVQCLGDAVFI 768
Fly 769 PAGAPHQVQNLHNCIKVAEDFVSPENITHCYHLTHEFRRLSHSHTNHEDKL---QIKNIIYHAIK 830
Fly 831 830 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
JHDM2 | NP_001287255.1 | JmjC | 605..657 | CDD:214721 | 20/52 (38%) |
cupin_like | 694..789 | CDD:304367 | 39/94 (41%) | ||
Hr | NP_077340.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 311..378 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 413..472 | 8/34 (24%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 509..543 | 7/59 (12%) | |||
LXXLL motif 1 | 560..564 | 1/3 (33%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 696..745 | 9/48 (19%) | |||
LXXLL motif 2 | 752..756 | 1/3 (33%) | |||
cupin_like | <1081..1132 | CDD:304367 | 26/50 (52%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350572 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1185631at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12549 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.950 |