DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm3 and KDM3A

DIOPT Version :10

Sequence 1:NP_788611.1 Gene:Kdm3 / 41143 FlyBaseID:FBgn0037703 Length:854 Species:Drosophila melanogaster
Sequence 2:NP_060903.2 Gene:KDM3A / 55818 HGNCID:20815 Length:1321 Species:Homo sapiens


Alignment Length:895 Identity:365/895 - (40%)
Similarity:477/895 - (53%) Gaps:173/895 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 IKRACCEVENPTL--KAEQRVQQ--EEESLGQVPPLTEEEQQRHDEFRNSGSIFLQDLPCFKLQQ 108
            :|.:..:|:|.:.  ::..::|.  ..:|:...|...::.||       ||..|:||..|..:  
Human   484 LKESSVKVDNESCCSRSNNKIQNAPSRKSVLTDPAKLKKLQQ-------SGEAFVQDDSCVNI-- 539

  Fly   109 AQPIAGSSPIPKCRECRRRNLATTEGEPSSVSDVYCRFYEFRRLQFNENGELCVVGF--PNPYSE 171
                  .:.:|||||||..:| ..:.|....|.|:|||:.|||||||::|.|.|.||  ||.|..
Human   540 ------VAQLPKCRECRLDSL-RKDKEQQKDSPVFCRFFHFRRLQFNKHGVLRVEGFLTPNKYDN 597

  Fly   172 PSPEDIAIWQP-DKNTPPTSGYMDIQVCRYILLHAGDQFCYIWHQEAEALSL---HQNTDGTIAW 232
               |.|.:|.| .||...    :|:...:|||.:.||.||.:...|.||:|.   |:.    :||
Human   598 ---EAIGLWLPLTKNVVG----IDLDTAKYILANIGDHFCQMVISEKEAMSTIEPHRQ----VAW 651

  Fly   233 KKAVKGTREICDVCDTTLFNYHWTCRKCGFGVCLDCVKDRKEGLRLRRAENAAQKGCDEYHWLLC 297
            |:||||.||:|||||||:||.||.|.:||||||:||.:.:::..:    :.||.|   .:.||.|
Human   652 KRAVKGVREMCDVCDTTIFNLHWVCPRCGFGVCVDCYRMKRKNCQ----QGAAYK---TFSWLKC 709

  Fly   298 SDPSGPQEHVLTELMLTQIIAGDALNVLGRLLHEVRTLWQVPQVCGC------LLSKQAIEDAQS 356
            ..   .|.|....||.||||.|.||..:|.::|.||..|.:...|.|      |.||.|     |
Human   710 VK---SQIHEPENLMPTQIIPGKALYDVGDIVHSVRAKWGIKANCPCSNRQFKLFSKPA-----S 766

  Fly   357 KEVIQDMIKESQLKQHTSYSSLASEQ----KVHQQQRLDQLHATKLEFARELG------------ 405
            ||         .|||    :|||.|:    .|.||      :.:.||.|...|            
Human   767 KE---------DLKQ----TSLAGEKPTLGAVLQQ------NPSVLEPAAVGGEAASKPAGSMKP 812

  Fly   406 ------------VDYVPGRVWTKETLGKDP-------------------------------ITTA 427
                        .|...|.| .||...|.|                               |.|.
Human   813 ACPASTSPLNWLADLTSGNV-NKENKEKQPTMPILKNEIKCLPPLPPLSKSSTVLHTFNSTILTP 876

  Fly   428 FDNLKHINFLR-----------KGLAGLRRFLP------------------PRTMTFAYSTQLAP 463
            ..| .:..|||           .||....:.|.                  |:.:|...|. |..
Human   877 VSN-NNSGFLRNLLNSSTGKTENGLKNTPKILDDIFASLVQNKTTSDLSKRPQGLTIKPSI-LGF 939

  Fly   464 GVPHEFLCDGRLLRLTDAMHPDNRVLFQEVWKCGQPVMISEVARSLNLDLWHPQAFCRDFGDKPN 528
            ..||.:|||.|||.|.|..:..|..:|:|.||.|||||:|.|...||.:||.|::|.::||::..
Human   940 DTPHYWLCDNRLLCLQDPNNKSNWNVFRECWKQGQPVMVSGVHHKLNSELWKPESFRKEFGEQEV 1004

  Fly   529 DLINCLNGNLVPNQPMRHFWEGFQCMTKRLPDAYGKPMLLKLKDWPPGDDFAEILPTRFADLMKG 593
            ||:||....::....:..||:||:.:..||.:. .:||:|||||||||:||.:::|:||.|||..
Human  1005 DLVNCRTNEIITGATVGDFWDGFEDVPNRLKNE-KEPMVLKLKDWPPGEDFRDMMPSRFDDLMAN 1068

  Fly   594 LPMPEYTLRTGNLNIASCLPKMFVPPDLGPKMYNAYGSALHPDK--GTTNLHLDISDAVNIMVYV 656
            :|:||||.|.|.||:||.||..||.||||||||||||.....|:  ||||||||:|||.|:||||
Human  1069 IPLPEYTRRDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYV 1133

  Fly   657 GIPQDGDTRPQMAATQKAIEIGGCDYITRARCQSPDVLPGALWHIFPARDADKIRDLLNRVTLEK 721
            |||: |... |.....|.|:.|..|.:|..|.......|||||||:.|:|.:|||:.|.:|:.|:
Human  1134 GIPK-GQCE-QEEEVLKTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVSEEQ 1196

  Fly   722 GFRLEPDHDPIHDQNWYLDDKLRARLFKEYGVEGHPIVQCLGDAVFIPAGAPHQVQNLHNCIKVA 786
            |.....||||||||:||||..||.||.:||||:|..|||.|||.|||||||||||.||::|||||
Human  1197 GQENPADHDPIHDQSWYLDRSLRKRLHQEYGVQGWAIVQFLGDVVFIPAGAPHQVHNLYSCIKVA 1261

  Fly   787 EDFVSPENITHCYHLTHEFRRLSHSHTNHEDKLQIKNIIYHAIKDCCTIL 836
            |||||||::.||:.||.|||.||.:|||||||||:||:||||:||...:|
Human  1262 EDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAML 1311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm3NP_788611.1 JmjC 605..657 CDD:214721 36/53 (68%)
cupin_RmlC-like 694..789 CDD:477354 62/94 (66%)
KDM3ANP_060903.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 307..336
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..402
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 438..472
LXXLL motif 885..889 2/3 (67%)
JmjC 1064..1134 CDD:214721 46/69 (67%)
cupin_RmlC-like 1151..1264 CDD:477354 66/112 (59%)
Blue background indicates that the domain is not in the aligned region.

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