Sequence 1: | NP_001287255.1 | Gene: | JHDM2 / 41143 | FlyBaseID: | FBgn0037703 | Length: | 854 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006256421.2 | Gene: | Jmjd1c / 171120 | RGDID: | 708458 | Length: | 2526 | Species: | Rattus norvegicus |
Alignment Length: | 972 | Identity: | 314/972 - (32%) |
---|---|---|---|
Similarity: | 468/972 - (48%) | Gaps: | 192/972 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 ATRTSRKRTISSTSFSIS-----------TRTDPKSIIEIHIFNDSLPIKRACCEVE-------- 56
Fly 57 -NPTLKAEQRVQQEEESLGQVPPLTEEEQQRHDEFRNSGSIFLQDLPCFKLQQAQPIAGSSPIPK 120
Fly 121 CRECRRRNLATTEGEPSSVSDVYCRFYEFRRLQFNENGELCVVGFPNPYSEPSPEDIAIWQPDKN 185
Fly 186 TPPTSGYMDIQVCRYILLHAGDQFCYIWHQEAEALSLHQNTDGTIAWKKAVKGTREICDVCDTTL 250
Fly 251 FNYHWTCRKCGFGVCLDCVKDRKEGLRLRRAENAAQKGCDEYHWLLCSDPSGPQEHVLTELMLTQ 315
Fly 316 IIAGDALNVLGRLLHEVRTLWQVPQVCGC------------------------------------ 344
Fly 345 ------------------------------------------LLSKQAIEDAQ-------SKEVI 360
Fly 361 QDMIKESQLKQHTSYSSLASEQKVHQQQRLDQLHAT--KLEF-ARELGVDYVP-----------G 411
Fly 412 RVWTKETLGKDPITTAFDNLKHINFLRKGLAGLRRFLPP-------------------RTMTFAY 457
Fly 458 STQLAPGVPHEFLCDGRLLRLTDAMHPDNRVLFQEVWKCGQPVMISEVARSLNLDLWHPQAFCRD 522
Fly 523 FGDKPNDLINCLNGNLVPNQPMRHFWEGFQCMTKRLPDAYGKPMLLKLKDWPPGDDFAEILPTRF 587
Fly 588 ADLMKGLPMPEYTLRTGNLNIASCLPKMFVPPDLGPKMYNAYG--SALHPDKGTTNLHLDISDAV 650
Fly 651 NIMVYVGIPQDGDTRPQMAATQKAIEIGGCDYITRARCQSPDVLPGALWHIFPARDADKIRDLLN 715
Fly 716 RVTLEKGFRLEPDHDPIHDQNWYLDDKLRARLFKEYGVEGHPIVQCLGDAVFIPAGAPHQVQNLH 780
Fly 781 NCIKVAEDFVSPENITHCYHLTHEFRRLSHSHTNHEDKLQIKNIIYHAIKDCCTILTRAVDE 842 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
JHDM2 | NP_001287255.1 | JmjC | 605..657 | CDD:214721 | 29/53 (55%) |
cupin_like | 694..789 | CDD:304367 | 51/94 (54%) | ||
Jmjd1c | XP_006256421.2 | RX-CC_like | 126..>174 | CDD:421994 | |
JmjC | 2264..2336 | CDD:214721 | 36/71 (51%) | ||
cupin_RmlC-like | 2368..2467 | CDD:424065 | 51/98 (52%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166350570 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1356 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1185631at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm45873 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102953 | |
Panther | 1 | 1.100 | - | - | O | PTHR12549 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X572 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
9 | 8.710 |