DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment JHDM2 and Hr

DIOPT Version :9

Sequence 1:NP_001287255.1 Gene:JHDM2 / 41143 FlyBaseID:FBgn0037703 Length:854 Species:Drosophila melanogaster
Sequence 2:NP_001366408.1 Gene:Hr / 15460 MGIID:96223 Length:1182 Species:Mus musculus


Alignment Length:840 Identity:219/840 - (26%)
Similarity:331/840 - (39%) Gaps:169/840 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 QQEEESLGQVPPLTEEEQQRHDEFRNSGSIFLQDLPCFKLQQAQPIAGSSPIPKCRECRRRNLAT 131
            |:..|::  :....|.|||........|.|.||:...........:||   :.:|:.|       
Mouse   444 QETPETI--IGSKAEAEQQEEQRGPRDGRIRLQESRLVDTSCQHHLAG---VTQCQSC------- 496

  Fly   132 TEGEPSSVSDVYCRFYEFRRLQFNENGELCVVGFPNPYSEPSP-EDIAIWQPDKNT--------P 187
                                  ....||:.|:...:..|..|| |:..:.:.|.:.        |
Mouse   497 ----------------------VQAAGEVGVLTGHSQKSRRSPLEEKQLEEEDSSATSEEGGGGP 539

  Fly   188 PTSGYMDIQVCRYILLHAGDQFCYIWHQEAEALSLHQNTDGTIAWKKAVKGTREICDVCDTTLFN 252
            .....::..:.:::|...||:.|.:..:|.|||:..|......|..:...|....|..|...|||
Mouse   540 GPEASLNKGLAKHLLSGLGDRLCRLLRKEREALAWAQREGQGPAMTEDSPGIPHCCSRCHHGLFN 604

  Fly   253 YHWTCRKCGFGVCLDCVKDRKEGLRLRRAENAAQKGCDEYHWLLCSDPSGPQEHVLTELMLTQII 317
            .||.|..|...:|:.|.:....|      :|..:.|..|.|...|:..:|   |....|:|||.:
Mouse   605 THWRCSHCSHRLCVACGRIAGAG------KNREKTGSQEQHTDDCAQEAG---HAACSLILTQFV 660

  Fly   318 AGDALNVLGRLLHEVRTLWQVPQVCGCLLSKQAI---EDAQSKEVIQ------------DMIKES 367
            :..||..|..::|:|...:.:...|.|.:..:..   :..|.||..:            |..:..
Mouse   661 SSQALAELSTVMHQVWAKFDIRGHCFCQVDARVWAPGDGGQQKEPTEKTPPTPQPSCNGDSNRTK 725

  Fly   368 QLKQHTSYSSLASEQKVHQQQRL------DQLHATKLEFARELGVD-----YVPGRVWTKETLGK 421
            .:|:.|..|:.:..:....:..|      :.|.:|.::..  ||.|     :.|   .|......
Mouse   726 DIKEETPDSTESPAEDGAGRSPLPCPSLCELLASTAVKLC--LGHDRIHMAFAP---VTPALPSD 785

  Fly   422 DPITTAFDN------------------LKHINFLRKGLAGLRRFLPPRTMTFAYSTQLAPGVPHE 468
            |.||...|:                  |:..:.|||||:     ||...:    .|:|:|     
Mouse   786 DRITNILDSIIAQVVERKIQEKALGPGLRAGSGLRKGLS-----LPLSPV----RTRLSP----- 836

  Fly   469 FLCDGRLLRLTDAMHPDNRVLFQEVWKCGQPVMISEVARSLNLDLWHPQAFCRDFGDKPNDLINC 533
               .|.||.|.:........||||.|:.||||::|.:.::|.|.||..:|            :..
Mouse   837 ---PGALLWLQEPRPKHGFHLFQEHWRQGQPVLVSGIQKTLRLSLWGMEA------------LGT 886

  Fly   534 LNGN------LVPNQPMR----HFWEGFQCMTKRLPDAYGKPMLLKLKDWPPGDDFAEILPTRFA 588
            |.|.      |.|.||..    .|||||.....|.....|..:||..   ..||..|    :|..
Mouse   887 LGGQVQTLTALGPPQPTNLDSTAFWEGFSHPETRPKLDEGSVLLLHR---TLGDKDA----SRVQ 944

  Fly   589 DLMKGLPMPEYTLRTGNLNIASCLPKMFVPPDLGPKMYNAYGSALHPDK-GTTNLHLDISDAVNI 652
            :|...||:|||....|.||:||.||.......|.|:::.|||...|... ||.||.:::||.::|
Mouse   945 NLASSLPLPEYCAHQGKLNLASYLPLGLTLHPLEPQLWAAYGVNSHRGHLGTKNLCVEVSDLISI 1009

  Fly   653 MVYVGIPQDGDTRPQMAATQKAIEIGGCDYITRARCQSPDVLPGALWHIFPARDADKIRDLLNRV 717
            :|:.    :....|...| ||.. :.|.|   .....||......:||:|.|:||.:||..|..|
Mouse  1010 LVHA----EAQLPPWYRA-QKDF-LSGLD---GEGLWSPGSQTSTVWHVFRAQDAQRIRRFLQMV 1065

  Fly   718 TLEKGFRLEPDHDPIHDQNWYLDDKLRARLFKEYGVEGHPIVQCLGDAVFIPAGAPHQVQNLHNC 782
            .......|||.    ...:.|||..||.||.:|:||....::|..|:||.:|||||||||.|.:.
Mouse  1066 CPAGAGTLEPG----APGSCYLDAGLRRRLREEWGVSCWTLLQAPGEAVLVPAGAPHQVQGLVST 1126

  Fly   783 IKVAEDFVSPENITHCYHLTHEFRRLSHSHTNHEDKL---QIKNIIYHAIKDCCTILTRA 839
            |.|.:.|:|||.......|.|:...|...|     ::   |:...::.|:|.....|..|
Mouse  1127 ISVTQHFLSPETSALSAQLYHQGASLPPDH-----RMLYAQMDRAVFQAVKAAVGALQEA 1181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JHDM2NP_001287255.1 JmjC 605..657 CDD:214721 20/52 (38%)
cupin_like 694..789 CDD:304367 39/94 (41%)
HrNP_001366408.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..257
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..380
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..443
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 507..546 6/38 (16%)
LXXLL motif 1 561..565 1/3 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 697..746 7/48 (15%)
LXXLL motif 2 753..757 0/3 (0%)
cupin_RmlC-like <1088..1133 CDD:424065 22/44 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847067
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1356
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1185631at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12549
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.810

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