DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ras85D and RABA6a

DIOPT Version :9

Sequence 1:NP_476699.1 Gene:Ras85D / 41140 FlyBaseID:FBgn0003205 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_177505.1 Gene:RABA6a / 843698 AraportID:AT1G73640 Length:233 Species:Arabidopsis thaliana


Alignment Length:165 Identity:53/165 - (32%)
Similarity:91/165 - (55%) Gaps:5/165 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTI--EDSYRKQVVIDGETCLLDILDTAGQEEYSA 66
            :|.|::|...||||.|..:..::.|..:..|||  |.:|| .|.:..:.....|.||||||.:.|
plant    14 FKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYR-NVHVGDKIIKAQIWDTAGQERFRA 77

  Fly    67 MRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDL-ASWNVNNEQA 130
            :...|.|...|.||::.:....:|::|..:..:::...:.|.| :||||||.|| .|..|..::.
plant    78 ITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETV-VVLVGNKSDLRQSREVEEDEG 141

  Fly   131 REVAKQYGIPYIETSAKTRMGVDDAFYTLVREIRK 165
            :.:|:..|:.::||||...:.|::||..::..|.:
plant   142 KTLAESEGLYFLETSALENVNVEEAFLVMIGRIHE 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ras85DNP_476699.1 H_N_K_Ras_like 3..164 CDD:133338 52/162 (32%)
RABA6aNP_177505.1 Rab11_like 11..175 CDD:206660 52/162 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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