DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ras85D and ras-1

DIOPT Version :9

Sequence 1:NP_476699.1 Gene:Ras85D / 41140 FlyBaseID:FBgn0003205 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_496623.1 Gene:ras-1 / 174875 WormBaseID:WBGene00004310 Length:212 Species:Caenorhabditis elegans


Alignment Length:193 Identity:97/193 - (50%)
Similarity:133/193 - (68%) Gaps:9/193 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD 69
            ::||||.|||||||||||.||.:||.:|||||||||.||..:|.:.|.|:|||||||||:|.||:
 Worm    19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQEEFSTMRE 83

  Fly    70 QYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLAS-WNVNNEQAREV 133
            ||:|||.|||:||||....|||::....|.|.|:||.::.|::|||||.||.: .:|...:|.|:
 Worm    84 QYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEAEEL 148

  Fly   134 AKQYGIPYIETSAKTRMGVDDAFYTLVREIRKDKDNK-----GRRGRKMNKP---NRRFKCKM 188
            |.:..|||:|.|||.|..||:||:.:||.:||.:.::     ....||:..|   .::..|::
 Worm   149 AHRLSIPYLECSAKIRKNVDEAFFDIVRLVRKYQHDERMPIHPHDDRKLESPIKLKKKKNCRI 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ras85DNP_476699.1 H_N_K_Ras_like 3..164 CDD:133338 91/159 (57%)
ras-1NP_496623.1 small_GTPase 30..181 CDD:197466 84/150 (56%)
M_R_Ras_like 30..179 CDD:133345 83/148 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1259506at2759
OrthoFinder 1 1.000 - - FOG0000092
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100217
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1068
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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