DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rlb1 and srfbp1

DIOPT Version :10

Sequence 1:NP_477099.1 Gene:Rlb1 / 41139 FlyBaseID:FBgn0014022 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_001011115.1 Gene:srfbp1 / 496528 XenbaseID:XB-GENE-941165 Length:535 Species:Xenopus tropicalis


Alignment Length:561 Identity:117/561 - (20%)
Similarity:223/561 - (39%) Gaps:132/561 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LKFNNLVISNKKVIQKARAQTIAKIVQKLRK------TKEALAKNPDSEKEKIRLRKNTECLAQL 62
            |..||.|:..:|.::|.:...|.|:.:.:.|      |:|.:.||   ::...||.:....:.:|
 Frog     5 LNLNNEVVKLRKDVKKVKVLIIRKLTRHIAKLKSKKGTEELILKN---QRRAQRLLEEIHSVKEL 66

  Fly    63 KALKYMDMVRQSLLQEGTNPNAVIANERSTPDELGIAMLRLNKLMHGLVDKFVETLKL-----ST 122
            |.    |.|.::.|::..:...|.....||.:|..:|.|..:.|:...:....|.:|.     .|
 Frog    67 KP----DDVTKTALRKEISFEKVCKKPNSTAEERALARLATHPLLKQKITAIKEAIKAFKDARKT 127

  Fly   123 TDKEAKWRE--------EILETSKR-RAKIER-TEERKRKRKELKEQKAQTKNRLEWLEQNKVVD 177
            ..:..:.||        :|.||.|. :||:.: |||.|..::.:||:|.  ||.||        |
 Frog   128 AAEGEREREKDEPEQVTKIKETKKPVQAKLNKNTEEIKSAKEHVKEEKC--KNLLE--------D 182

  Fly   178 ADVNGATA-ETPTLQVSKVNDQEIPQSFAKTENSPVLKVKKEKTPKTPAKK----ERNLQKKQAF 237
            :|.....| |.|.:|      :.:|:..|:.:..|..:..:....:.||.:    ||...::.|.
 Frog   183 SDKGTEKALELPYVQ------ENLPEQTAENKEQPKAQDVERPAVERPAVERPAVERPAVERPAV 241

  Fly   238 DEQINPEITKLSSKKQNLN--TIKENNAEPQLEGRPKESKP---KPFEKKPARE----QKP---K 290
            :   .|.:.:.:.::..:.  .::....|.....||...:|   :|..::||.|    ::|   :
 Frog   242 E---RPAVERPAVERPAVERPAVERPAVERPAVERPAVERPAVERPAVERPAVERPAVERPAVER 303

  Fly   291 PRLER----QPSIDE---EEPQLDN---NRPTHVVDP-------------------------FFI 320
            |.:||    :|:::.   |.|.:::   .||.....|                         :|.
 Frog   304 PAVERPAVERPAVERPAVERPVVESPAVERPPVESPPKKKACLEQELGCELSDIEDSDKEKEYFD 368

  Fly   321 TESGQPYLSSAVVLSGDNDSEADEEQAPPPVKRFRNEDRRSNTYREKPERQPEFKARKPTDDRHP 385
            ..:.:.:...:.... |:||.:|.:.....::|.:.:....:..::|.|:.|..|.:..|.:...
 Frog   369 DSTEERFYKHSSSFE-DSDSGSDNDFFIGKIRRTKKKKSDKDGSKQKEEKVPPTKEKAQTSEVQK 432

  Fly   386 ---------------SWLAKQQQKPIIGDFRGKKITFGDDGQAAEII--------APSINQLTAT 427
                           ..|::.:.||   .|..::..|..:.....::        .|..::.|:.
 Frog   433 EIPTAKSMKLKSVFCKSLSQTKPKP---SFTKRETNFRQERNKRPVMPQASPLAKKPLQSKATSV 494

  Fly   428 AAP---LPTDGMHPSWVAKQKFK---PKIAAFQGTKIKFDE 462
            ..|   |....:||||.|.:|.|   .:|..|||.||.||:
 Frog   495 RQPGRKLEAQPLHPSWEASRKRKEQQAQITKFQGKKIVFDD 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rlb1NP_477099.1 PTZ00108 <3..345 CDD:240271 87/413 (21%)
BUD22 <367..461 CDD:401132 27/122 (22%)
srfbp1NP_001011115.1 PTZ00108 <8..387 CDD:240271 83/405 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..435 63/326 (19%)
rne <192..340 CDD:236766 29/156 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 453..535 22/84 (26%)
BUD22 <469..534 CDD:401132 17/64 (27%)

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